Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71282 | Canola | nucleus | 49.31 | 91.42 |
| CDY71179 | Canola | nucleus | 47.45 | 90.31 |
| Bra011741.1-P | Field mustard | nucleus | 90.05 | 89.84 |
| CDX69282 | Canola | nucleus | 81.94 | 88.5 |
| CDY29538 | Canola | nucleus | 87.96 | 87.96 |
| Bra017809.1-P | Field mustard | nucleus | 87.73 | 87.73 |
| CDY62228 | Canola | nucleus | 86.57 | 86.77 |
| TraesCS2A01G514200.1 | Wheat | nucleus | 50.23 | 58.81 |
| AT5G67180.1 | Thale cress | nucleus | 47.22 | 57.95 |
| Solyc03g044300.2.1 | Tomato | nucleus | 53.7 | 57.86 |
| GSMUA_Achr8P18550_001 | Banana | endoplasmic reticulum, nucleus | 45.83 | 54.7 |
| VIT_07s0031g00220.t01 | Wine grape | nucleus | 60.88 | 51.87 |
| KRH28441 | Soybean | nucleus | 59.03 | 51.41 |
| Solyc02g093150.2.1 | Tomato | nucleus | 52.55 | 50.9 |
| PGSC0003DMT400016585 | Potato | nucleus | 54.63 | 49.68 |
| Os04t0649100-03 | Rice | nucleus | 52.55 | 49.35 |
| PGSC0003DMT400010231 | Potato | nucleus | 58.1 | 48.93 |
| Solyc02g064960.2.1 | Tomato | nucleus | 56.71 | 48.61 |
| PGSC0003DMT400065501 | Potato | nucleus | 56.02 | 47.92 |
| Zm00001d026448_P001 | Maize | nucleus | 45.14 | 47.22 |
| TraesCS2B01G542400.2 | Wheat | nucleus | 51.62 | 46.07 |
| TraesCS2D01G515800.1 | Wheat | nucleus | 51.62 | 45.88 |
| OQU82446 | Sorghum | endoplasmic reticulum, vacuole | 38.89 | 42.42 |
| Zm00001d002075_P001 | Maize | nucleus | 51.85 | 42.03 |
| AT2G28550.3 | Thale cress | nucleus | 44.91 | 41.81 |
| AT3G54990.1 | Thale cress | nucleus | 31.02 | 38.73 |
| AT2G39250.1 | Thale cress | nucleus | 26.85 | 35.69 |
| AT5G60120.2 | Thale cress | nucleus | 35.65 | 30.37 |
| AT2G41710.4 | Thale cress | nucleus | 20.14 | 18.95 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | EntrezGene:829845 | ProteinID:AEE86717.1 | ProteinID:AEE86718.1 | Symbol:AP2 |
| InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT4G36920 | EnsemblPlantsGene:AT4G36920 | RefSeq:AT4G36920 |
| TAIR:AT4G36920 | RefSeq:AT4G36920-TAIR-G | EnsemblPlants:AT4G36920.1 | TAIR:AT4G36920.1 | EMBL:AY128328 | Unigene:At.4638 |
| ProteinID:CAB16765.1 | ProteinID:CAB80358.1 | InterPro:DNA-bd_dom_sf | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0010073 | GO:GO:0010093 | GO:GO:0030154 | GO:GO:0048316 | GO:GO:0048481 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_001190938.1 | RefSeq:NP_195410.1 | UniProt:P47927 | PFAM:PF00847 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF18 |
| SMART:SM00380 | SUPFAM:SSF54171 | EMBL:U12546 | UniParc:UPI0000125BC9 | SEG:seg | : |
Description
AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
Coordinates
chr4:+:17400724..17403392
Molecular Weight (calculated)
47836.0 Da
IEP (calculated)
7.297
GRAVY (calculated)
-0.794
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.