Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04573 | Canola | nucleus | 84.27 | 86.12 |
| Bra011939.1-P | Field mustard | nucleus | 84.27 | 86.12 |
| CDY15760 | Canola | nucleus | 84.05 | 85.9 |
| CDX95767 | Canola | nucleus | 74.57 | 82.97 |
| Bra000487.1-P | Field mustard | nucleus | 72.2 | 80.34 |
| CDX83296 | Canola | nucleus | 74.35 | 79.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.97 | 58.12 |
| GSMUA_Achr8P01980_001 | Banana | nucleus | 40.52 | 50.81 |
| KRH22956 | Soybean | nucleus | 50.86 | 49.58 |
| AT5G67180.1 | Thale cress | nucleus | 37.5 | 49.43 |
| KRH10362 | Soybean | nucleus | 50.65 | 48.45 |
| GSMUA_Achr5P29290_001 | Banana | nucleus | 44.4 | 47.91 |
| GSMUA_Achr9P03060_001 | Banana | nucleus | 44.61 | 47.81 |
| PGSC0003DMT400071732 | Potato | nucleus | 46.98 | 47.7 |
| GSMUA_Achr10P... | Banana | nucleus | 45.26 | 47.51 |
| GSMUA_Achr6P33140_001 | Banana | nucleus | 48.28 | 46.96 |
| Solyc10g084340.1.1 | Tomato | nucleus | 45.91 | 46.1 |
| Solyc09g007260.2.1 | Tomato | nucleus | 45.04 | 45.93 |
| PGSC0003DMT400028706 | Potato | nucleus | 43.97 | 45.84 |
| GSMUA_Achr11P... | Banana | nucleus | 42.24 | 45.37 |
| AT4G36920.1 | Thale cress | nucleus | 41.81 | 44.91 |
| GSMUA_Achr6P34420_001 | Banana | nucleus | 45.69 | 44.54 |
| GSMUA_Achr5P07270_001 | Banana | nucleus | 45.91 | 43.74 |
| GSMUA_Achr8P21030_001 | Banana | nucleus | 46.98 | 43.43 |
| AT3G54990.1 | Thale cress | nucleus | 30.39 | 40.75 |
| GSMUA_Achr9P04270_001 | Banana | nucleus | 41.16 | 40.55 |
| AT5G60120.2 | Thale cress | nucleus | 43.1 | 39.45 |
| AT2G39250.1 | Thale cress | nucleus | 26.29 | 37.54 |
| AT2G41710.4 | Thale cress | nucleus | 20.91 | 21.13 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | EntrezGene:817403 | ProteinID:AEC08139.1 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G28550 | EnsemblPlantsGene:AT2G28550 | RefSeq:AT2G28550 | TAIR:AT2G28550 | RefSeq:AT2G28550-TAIR-G |
| EnsemblPlants:AT2G28550.3 | TAIR:AT2G28550.3 | InterPro:DNA-bd_dom_sf | UniProt:F4IIR3 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010228 |
| InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_001189625.1 | PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | Symbol:RAP2.7 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00001799A2 | SEG:seg | : | : | : | : |
Description
RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
Coordinates
chr2:-:12225656..12228624
Molecular Weight (calculated)
51159.8 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.778
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.