Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011939.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY15760 | Canola | nucleus | 97.58 | 97.58 |
| CDY19560 | Canola | nucleus | 21.81 | 96.12 |
| CDX95767 | Canola | nucleus | 77.75 | 84.65 |
| AT2G28550.3 | Thale cress | nucleus | 86.12 | 84.27 |
| CDX83296 | Canola | nucleus | 77.31 | 80.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.93 | 58.12 |
| GSMUA_Achr8P01980_001 | Banana | nucleus | 40.97 | 50.27 |
| CDY12814 | Canola | nucleus | 39.43 | 49.58 |
| KRH22956 | Soybean | nucleus | 51.76 | 49.37 |
| CDY01432 | Canola | nucleus | 38.99 | 49.17 |
| CDX69282 | Canola | nucleus | 42.51 | 48.25 |
| PGSC0003DMT400071732 | Potato | nucleus | 48.46 | 48.14 |
| GSMUA_Achr10P... | Banana | nucleus | 46.7 | 47.96 |
| KRH10362 | Soybean | nucleus | 50.66 | 47.42 |
| GSMUA_Achr9P03060_001 | Banana | nucleus | 44.93 | 47.11 |
| GSMUA_Achr6P33140_001 | Banana | nucleus | 49.12 | 46.75 |
| CDY62228 | Canola | nucleus | 44.27 | 46.64 |
| Solyc09g007260.2.1 | Tomato | nucleus | 46.7 | 46.59 |
| PGSC0003DMT400028706 | Potato | nucleus | 45.37 | 46.29 |
| Solyc10g084340.1.1 | Tomato | nucleus | 46.92 | 46.1 |
| CDY29538 | Canola | nucleus | 43.61 | 45.83 |
| GSMUA_Achr11P... | Banana | nucleus | 43.39 | 45.6 |
| GSMUA_Achr5P29290_001 | Banana | nucleus | 43.17 | 45.58 |
| CDY71179 | Canola | nucleus | 22.69 | 45.37 |
| CDY71282 | Canola | nucleus | 22.91 | 44.64 |
| GSMUA_Achr6P34420_001 | Banana | nucleus | 46.48 | 44.33 |
| GSMUA_Achr5P07270_001 | Banana | nucleus | 46.7 | 43.53 |
| GSMUA_Achr8P21030_001 | Banana | nucleus | 47.36 | 42.83 |
| CDY07510 | Canola | nucleus | 30.62 | 42.38 |
| CDY09223 | Canola | nucleus | 40.09 | 42.23 |
| CDY68119 | Canola | nucleus | 31.5 | 41.69 |
| CDY31576 | Canola | nucleus | 41.41 | 41.59 |
| GSMUA_Achr9P04270_001 | Banana | nucleus | 42.73 | 41.19 |
| CDX73419 | Canola | nucleus | 31.06 | 40.99 |
| CDX80199 | Canola | nucleus | 40.97 | 40.97 |
| CDY71682 | Canola | nucleus | 10.57 | 23.19 |
| CDY22537 | Canola | nucleus | 21.15 | 22.43 |
| CDX79921 | Canola | nucleus | 21.15 | 22.27 |
| CDY35402 | Canola | nucleus | 20.04 | 22.14 |
| CDY23833 | Canola | nucleus | 20.7 | 22.12 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078EY98 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY04573 | ProteinID:CDY04573 | ProteinID:CDY04573.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00118765001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00025412DE | SEG:seg | : | : |
Description
BnaA07g13990D
Coordinates
chrLK031955:-:889041..891782
Molecular Weight (calculated)
49572.8 Da
IEP (calculated)
6.945
GRAVY (calculated)
-0.785
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLNLDADS PESTQYGDSY ADRKTSDGSG NRSETSTSSV INAEADDDSC STRAFTLNFD ILKVGSSGDG CGGGGDESTA VTKEFFPVAG DCGHLRGSSS
101: RSWIDLSFDG SRQGETNLVA PAPAPAPVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFTLGD
201: YEEDMKQVQN LSKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDSEVEAA RAYDKAAISS NGREAVTNFE LSSYQNETNS
301: ETNNQGAHDK LDLSLGMSLS PGNASKQNGR LFHYPSNTYE TQRGVSLTIG NEFMGKPVNA PLPYGSSDHR AYWNGYNNPV EGRATEKRSE AEGGGMMSNW
401: GWQGPGQTSA MRPQPPGPQP QLFSVAAASS GFSNFRQQPP NDNASSLGYF YPQP
101: RSWIDLSFDG SRQGETNLVA PAPAPAPVKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFTLGD
201: YEEDMKQVQN LSKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDSEVEAA RAYDKAAISS NGREAVTNFE LSSYQNETNS
301: ETNNQGAHDK LDLSLGMSLS PGNASKQNGR LFHYPSNTYE TQRGVSLTIG NEFMGKPVNA PLPYGSSDHR AYWNGYNNPV EGRATEKRSE AEGGGMMSNW
401: GWQGPGQTSA MRPQPPGPQP QLFSVAAASS GFSNFRQQPP NDNASSLGYF YPQP
001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
Arabidopsis Description
RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.