Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002510.1-P | Field mustard | nucleus | 98.23 | 98.23 |
| CDX80199 | Canola | nucleus | 93.14 | 92.73 |
| CDY09223 | Canola | nucleus | 75.66 | 79.35 |
| CDX95767 | Canola | nucleus | 40.49 | 43.88 |
| CDY15760 | Canola | nucleus | 41.81 | 41.63 |
| CDX83296 | Canola | nucleus | 40.04 | 41.51 |
| CDY04573 | Canola | nucleus | 41.59 | 41.41 |
| Solyc04g049800.2.1 | Tomato | nucleus | 36.06 | 40.95 |
| PGSC0003DMT400031401 | Potato | nucleus | 36.28 | 40.29 |
| CDY07510 | Canola | nucleus | 29.2 | 40.24 |
| CDY68119 | Canola | nucleus | 30.09 | 39.65 |
| CDY12814 | Canola | nucleus | 31.42 | 39.34 |
| CDY01432 | Canola | nucleus | 30.97 | 38.89 |
| CDX73419 | Canola | nucleus | 29.42 | 38.66 |
| VIT_13s0019g03550.t01 | Wine grape | nucleus | 41.81 | 38.03 |
| Zm00001d010987_P001 | Maize | nucleus | 31.19 | 36.53 |
| CDX69282 | Canola | nucleus | 32.3 | 36.5 |
| OQU77289 | Sorghum | nucleus | 34.96 | 36.16 |
| CDY62228 | Canola | nucleus | 33.85 | 35.5 |
| CDY29538 | Canola | nucleus | 33.41 | 34.95 |
| KRH70384 | Soybean | nucleus | 32.08 | 34.86 |
| Os05t0121600-01 | Rice | nucleus | 39.38 | 34.77 |
| KRH33335 | Soybean | nucleus | 30.97 | 33.9 |
| Zm00001d035512_P001 | Maize | nucleus | 38.05 | 33.66 |
| TraesCS1B01G076300.1 | Wheat | nucleus | 38.05 | 33.59 |
| TraesCS1A01G058400.1 | Wheat | nucleus | 37.61 | 33.33 |
| HORVU1Hr1G011800.4 | Barley | nucleus | 37.83 | 33.27 |
| TraesCS1D01G059200.1 | Wheat | nucleus | 37.61 | 33.27 |
| CDY71179 | Canola | nucleus | 14.38 | 28.63 |
| CDY71282 | Canola | nucleus | 14.16 | 27.47 |
| CDY19560 | Canola | nucleus | 5.31 | 23.3 |
| CDY23833 | Canola | nucleus | 19.69 | 20.94 |
| CDY71682 | Canola | nucleus | 9.29 | 20.29 |
| CDX79921 | Canola | nucleus | 19.25 | 20.19 |
| CDY22537 | Canola | nucleus | 19.03 | 20.09 |
| CDY35402 | Canola | nucleus | 17.7 | 19.46 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078H1D4 | UniProt:A0A078H1D4 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY31576 | ProteinID:CDY31576 | ProteinID:CDY31576.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00047898001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EF2A31 | SEG:seg | : | : | : |
Description
BnaA10g12950DBnaA10g12950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1D4]
Coordinates
chrLK032274:-:362767..366306
Molecular Weight (calculated)
49308.5 Da
IEP (calculated)
7.983
GRAVY (calculated)
-0.625
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLNLDLDS KEVSGAVLNQ MDESVTSNSS LVNAEASSCI DGEEEMCSAP AVKFQFEILK GGGREGEEGR SEVMTKEFFP VEKGGSFVDL SGQSSRSSVD
101: ISFQRGNQGG DAARVTQPPA QPVKKSRRGP RSKSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAV KFRGLEADIN FVISDYEEDL
201: KQMANLSKEE VVQVLRRQSS GFSRNNSRYQ GANLPKIGGW GGAQMEQLNG NMAYDKATAT KWNGREAASL IEPHASRIIP ETANVKLDLN LGISLSLGDS
301: PKQNLNNIVC GRNSKMENHM AASTCDTPFN FLKRGSDHLI NRHVHPSALF SPMERTPREG FMPGSPQSFP VRTWQAQDQP SGGTATTATA STLLSNAASS
401: GFSHSATRPP SSSTASLHPS QPFLNLNIPG LYVIHPSQHQ HHHDINRSQP PP
101: ISFQRGNQGG DAARVTQPPA QPVKKSRRGP RSKSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAV KFRGLEADIN FVISDYEEDL
201: KQMANLSKEE VVQVLRRQSS GFSRNNSRYQ GANLPKIGGW GGAQMEQLNG NMAYDKATAT KWNGREAASL IEPHASRIIP ETANVKLDLN LGISLSLGDS
301: PKQNLNNIVC GRNSKMENHM AASTCDTPFN FLKRGSDHLI NRHVHPSALF SPMERTPREG FMPGSPQSFP VRTWQAQDQP SGGTATTATA STLLSNAASS
401: GFSHSATRPP SSSTASLHPS QPFLNLNIPG LYVIHPSQHQ HHHDINRSQP PP
001: MLDLNLDVDS TESTQNERDS ITVKGVSLNQ MDESVTSNSS VVNAEASSCI DGEDELCSTR TVKFQFEILK GGGEEEEEDD DERSAVMMTK EFFPVAKGMN
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSV CGRNTMMENH MAAAACDTPF NFLKRGSDHL NNRHALPSAF FSPMERTPEK GLMLRSHQSF
401: PARTWQGHDQ SSGGTAVAAT APPLFSNAAS SGFSLSATRP PSSTAIHHPS QPFVNLNQPG LYVIHPSDYI SQHQHNLMNR PQPPP
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSV CGRNTMMENH MAAAACDTPF NFLKRGSDHL NNRHALPSAF FSPMERTPEK GLMLRSHQSF
401: PARTWQGHDQ SSGGTAVAAT APPLFSNAAS SGFSLSATRP PSSTAIHHPS QPFVNLNQPG LYVIHPSDYI SQHQHNLMNR PQPPP
Arabidopsis Description
TOE2Target of early activation tagged (EAT) 2 [Source:UniProtKB/TrEMBL;Acc:F4JXG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.