CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33335	Soybean	nucleus	87.74	88.38
Solyc04g049800.2.1	Tomato	nucleus	38.46	40.2
PGSC0003DMT400031401	Potato	nucleus	38.22	39.07
VIT_13s0019g03550.t01	Wine grape	nucleus	44.95	37.63
KRG89074	Soybean	nucleus	40.14	37.28
Zm00001d010987_P001	Maize	nucleus	34.13	36.79
KRH22956	Soybean	nucleus	40.14	35.08
CDY09223	Canola	nucleus	35.58	34.34
Bra020262.1-P	Field mustard	nucleus	35.34	34.27
KRH67634	Soybean	nucleus	37.5	33.99
KRH24963	Soybean	nucleus	40.14	33.87
KRH10362	Soybean	nucleus	39.18	33.61
OQU77289	Sorghum	nucleus	34.38	32.72
KRG95917	Soybean	mitochondrion	38.46	32.39
Bra002510.1-P	Field mustard	nucleus	35.1	32.3
Os05t0121600-01	Rice	nucleus	39.66	32.23
TraesCS1A01G058400.1	Wheat	nucleus	39.42	32.16
TraesCS1D01G059200.1	Wheat	nucleus	39.42	32.09
Zm00001d035512_P001	Maize	nucleus	39.42	32.09
CDY31576	Canola	nucleus	34.86	32.08
HORVU1Hr1G011800.4	Barley	nucleus	39.18	31.71
TraesCS1B01G076300.1	Wheat	nucleus	38.94	31.64
CDX80199	Canola	nucleus	34.38	31.5
KRH77030	Soybean	nucleus	36.78	30.48
AT5G60120.2	Thale cress	nucleus	35.1	28.8
KRH04560	Soybean	nucleus	36.54	28.57
KRH57898	Soybean	nucleus	36.54	28.52
KRH28441	Soybean	nucleus	32.93	27.62
KRG95240	Soybean	nucleus	19.71	19.62
KRH66909	Soybean	nucleus	19.47	19.15
KRH72011	Soybean	nucleus	18.27	17.0

Protein Annotations

EntrezGene:100776138	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02000768	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ncoils:Coil	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G087400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	UniProt:I1JDJ6	InterPro:IPR001471	InterPro:IPR036955
ProteinID:KRH70383.1	EnsemblPlants:KRH70384	ProteinID:KRH70384	ProteinID:KRH70384.1	EMBL:KT031071	PFAM:PF00847
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF70	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000233758C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:7618900..7624414

Molecular Weight (calculated)

46349.7 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.587

Length

416 amino acids

Sequence
(BLAST)

001: MAMFDLNVDI NHCDADADSS CDQKGLVLQS FPPEISDSRT SSSSVWNPVE EDSSNNSSPL IFDILKKERD ESEFDAATER VNKEQNMAPQ EAEIVARTLF
101: PVTAAVDKGV RVPDFKLGLW GKTECLNLSL PEPDGQNGLR TLQQKVPPVR KNRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAQAAARA
201: YDRAAIKFRG VDADINFSLS DYEEDLKQMR NLSKEEFVLL LRRQINGISR RSSTYRGALA LRKDAQGEPR MGPFVGMTCY PKPSINCDDG KAEASFKPCS
301: YKGEIIVNSN MTGTCHNLDL SLGISPSSKR LKNNDYSGGY SFGCMTCKIP EERGPMEKVM VDRIKNVPLQ KISNLAWQLC SNGSIVPRPF QPNAASSGFV
401: SSSSCLITRT SNQHTY

Best Arabidopsis Sequence Match ( AT2G28550.1 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKAY DKAAINTNGR EAVTNFEMSS YQNEINSESN
301: NSEIDLNLGI SLSTGNAPKQ NGRLFHFPSN TYETQRGVSL RIDNEYMGKP VNTPLPYGSS DHRLYWNGAC PSYNNPAEGR ATEKRSEAEG MMSNWGWQRP
401: GQTSAVRPQP PGPQPPPLFS VAAASSGFSH FRPQPPNDNA TRGYFYPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.