CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04560	Soybean	nucleus	92.5	92.67
KRH77030	Soybean	nucleus	74.86	79.48
KRH28441	Soybean	nucleus	72.98	78.43
VIT_07s0031g00220.t01	Wine grape	nucleus	66.98	70.41
PGSC0003DMT400010231	Potato	nucleus	57.97	60.23
Solyc02g093150.2.1	Tomato	nucleus	49.72	59.42
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	38.84	57.18
KRG89074	Soybean	nucleus	38.84	46.21
KRH24963	Soybean	nucleus	39.59	42.8
KRH22956	Soybean	nucleus	37.9	42.44
KRH67634	Soybean	nucleus	36.4	42.27
KRH10362	Soybean	nucleus	37.52	41.24
KRG95917	Soybean	mitochondrion	36.59	39.47
KRH70384	Soybean	nucleus	28.52	36.54
KRH33335	Soybean	nucleus	27.39	35.35
KRG95240	Soybean	nucleus	17.45	22.25
KRH66909	Soybean	nucleus	17.07	21.51
KRH72011	Soybean	nucleus	16.89	20.13

Protein Annotations

EntrezGene:100794096	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02003120	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_05G091200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7KP57	EnsemblPlants:KRH57898
ProteinID:KRH57898	ProteinID:KRH57898.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00023C508C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:21947029..21951107

Molecular Weight (calculated)

59060.9 Da

IEP (calculated)

6.468

GRAVY (calculated)

-0.890

Length

533 amino acids

Sequence
(BLAST)

001: MWDLNDSPDQ RINKDEESEE GCSSLNKTSF DGDDDNNNNK GKRVGSVSNS SSSAVVIGDG SEEEYEEEEE DEEGVGVGGG RSMKKRSSKI FGFSVTQNEE
101: ESMDSDHPPV TRQFFPVEDA DVAVATGGGG TGVSSTFPRA HWVGVKFCQS ETLGTGKSSV EVSQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG
201: KQVYLGGFDT AHAAARAYDR AAIKFRGVEA DINFNIEDYE DDLKQMSNLT KEEFVHVLRR QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL
301: FDTEIEAARA YDKAAIKCNG KEAVTNFDPS IYDNELNSES TGNAPDHNLD LSLGNSTSNP GNDQALGNQA PNAVTHDQHM PSESNWRNGG IKPKLVNILP
401: KPCYRSNNKD THGRDVHGES ETLRMLSQTH LHSPAFNEMQ QRYGPYRSPG GESQMLQNFA HIHPPNFHFP RSSIGGRIGS DLSLSVADQQ QWQTGPSRYL
501: ATAAASSSFQ QEIRPSSQGW LQKNGLHSLM RPS

Best Arabidopsis Sequence Match ( AT4G36920.2 )
(BLAST)

001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS

Arabidopsis Description

AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.