CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67634	Soybean	nucleus	85.83	92.37
GSMUA_AchrUn_...	Banana	nucleus	41.3	58.12
KRG89074	Soybean	nucleus	49.8	54.91
GSMUA_Achr8P01980_001	Banana	nucleus	40.28	53.78
VIT_08s0040g03180.t01	Wine grape	nucleus	53.64	53.54
GSMUA_Achr10P...	Banana	nucleus	47.57	53.17
KRH24963	Soybean	nucleus	51.82	51.93
KRH22956	Soybean	nucleus	50.0	51.89
GSMUA_Achr11P...	Banana	nucleus	44.94	51.39
KRH10362	Soybean	nucleus	50.0	50.93
GSMUA_Achr5P29290_001	Banana	nucleus	43.52	50.0
GSMUA_Achr9P03060_001	Banana	nucleus	43.32	49.42
GSMUA_Achr6P33140_001	Banana	nucleus	46.96	48.64
GSMUA_Achr8P21030_001	Banana	nucleus	48.79	48.01
Solyc06g075510.2.1	Tomato	nucleus	45.95	47.89
PGSC0003DMT400016881	Potato	nucleus	24.29	46.88
GSMUA_Achr6P34420_001	Banana	nucleus	43.32	44.96
GSMUA_Achr5P07270_001	Banana	nucleus	42.71	43.33
GSMUA_Achr9P04270_001	Banana	nucleus	40.08	42.04
KRH77030	Soybean	nucleus	40.89	40.24
KRH70384	Soybean	nucleus	32.39	38.46
KRH33335	Soybean	nucleus	31.38	37.53
KRH28441	Soybean	nucleus	37.45	37.3
KRH04560	Soybean	nucleus	40.08	37.22
KRH57898	Soybean	nucleus	39.47	36.59
KRG95240	Soybean	nucleus	19.03	22.49
KRH66909	Soybean	nucleus	18.83	21.99
KRH72011	Soybean	nucleus	19.03	21.03

Protein Annotations

EntrezGene:100797238	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02012140	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_19G178200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7MYY2	EnsemblPlants:KRG95917
ProteinID:KRG95917	ProteinID:KRG95917.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF28	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002957A0B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:43733302..43737925

Molecular Weight (calculated)

54333.1 Da

IEP (calculated)

8.020

GRAVY (calculated)

-0.527

Length

494 amino acids

Sequence
(BLAST)

001: MALRRLRRNL ALSIPRRQSP EGDLFNGAST KQTHAAMLDL NLNADSASDL QMESSGSFNS SVVNAADTDD SCSYGDAVAY NFAILNNAAT SDGLPLGAAG
101: EPSVRTIQLF PAADSGASAA AWLDFSSKVD QHGAPPEQRI TPRQQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHVAARAYD
201: RAAIKFRGVD ADINFNVSDY DEDIKQMSNF TKEEFVHILR RQSTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDSELEAAR AYDKAAIKCN
301: GREAVTNFEP SLYEGEVISQ SDNEDTKQSL DLNLGIAPPS YSDGQIKNTP SNGSGMIAPQ SWDDIPLDKR VMFEHSGSRS RTIQPPHHGF SIASGQHPSV
401: WNGSNFFPIY EETAIEKRME AAPVPNWAWQ VQGPYGRATL APPFSTAASS GFPSTIIPSA ADTQIRFPNM TFLHSHFPSS ITNSGTISPF FFGS

Best Arabidopsis Sequence Match ( AT2G28550.1 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKAY DKAAINTNGR EAVTNFEMSS YQNEINSESN
301: NSEIDLNLGI SLSTGNAPKQ NGRLFHFPSN TYETQRGVSL RIDNEYMGKP VNTPLPYGSS DHRLYWNGAC PSYNNPAEGR ATEKRSEAEG MMSNWGWQRP
401: GQTSAVRPQP PGPQPPPLFS VAAASSGFSH FRPQPPNDNA TRGYFYPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.