CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22956	Soybean	nucleus	88.45	90.13
KRH24963	Soybean	nucleus	74.23	73.02
KRG89074	Soybean	nucleus	67.01	72.54
GSMUA_AchrUn_...	Banana	nucleus	43.51	60.11
GSMUA_Achr8P01980_001	Banana	nucleus	42.06	55.14
GSMUA_Achr10P...	Banana	nucleus	48.66	53.39
KRH67634	Soybean	nucleus	49.9	52.72
GSMUA_Achr6P33140_001	Banana	nucleus	51.34	52.2
CDY15760	Canola	nucleus	47.63	50.88
Bra011939.1-P	Field mustard	nucleus	47.42	50.66
CDY04573	Canola	nucleus	47.42	50.66
AT2G28550.3	Thale cress	nucleus	48.45	50.65
PGSC0003DMT400028706	Potato	nucleus	46.19	50.34
GSMUA_Achr11P...	Banana	nucleus	44.74	50.23
KRG95917	Soybean	mitochondrion	50.93	50.0
PGSC0003DMT400071732	Potato	nucleus	46.8	49.67
GSMUA_Achr9P03060_001	Banana	nucleus	44.33	49.65
CDX95767	Canola	nucleus	42.68	49.64
GSMUA_Achr5P29290_001	Banana	nucleus	43.92	49.53
Solyc10g084340.1.1	Tomato	nucleus	47.01	49.35
Solyc09g007260.2.1	Tomato	nucleus	46.19	49.23
Bra000487.1-P	Field mustard	nucleus	41.44	48.2
CDX83296	Canola	nucleus	42.47	47.25
GSMUA_Achr8P21030_001	Banana	nucleus	48.87	47.21
GSMUA_Achr6P34420_001	Banana	nucleus	44.74	45.59
GSMUA_Achr5P07270_001	Banana	nucleus	45.77	45.59
GSMUA_Achr9P04270_001	Banana	nucleus	39.79	40.98
KRH77030	Soybean	nucleus	41.65	40.24
KRH70384	Soybean	nucleus	33.61	39.18
KRH28441	Soybean	nucleus	38.97	38.1
KRH33335	Soybean	nucleus	32.16	37.77
KRH04560	Soybean	nucleus	41.24	37.59
KRH57898	Soybean	nucleus	41.24	37.52
KRG95240	Soybean	nucleus	19.79	22.97
KRH66909	Soybean	nucleus	19.18	21.99
KRH72011	Soybean	nucleus	20.21	21.92

Protein Annotations

EntrezGene:100796271	MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0R0FVZ4	EMBL:ACUP02009140	InterPro:AP2-like_transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_15G044400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH10362
ProteinID:KRH10362	ProteinID:KRH10362.1	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF46
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0006EDB68B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:3527819..3532707

Molecular Weight (calculated)

53754.8 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.589

Length

485 amino acids

Sequence
(BLAST)

001: MLDLNLNAES TQNNESLVLL DKFPEASLGT SNSSVVNAEG SSNEDSCSTR AGDVFAFSFG ILKVEGANEV VATATKELFP VSSENWQGQS STSSSQARKN
101: LMDLPLDHQN GEVKVVQVQP QPQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH IAARAYDRAA IKFRGLDADI NFDLVDYEED
201: LKQMKNLSKQ EFVHILRRHS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEVEAARAYD KAAIKCNRRE AVTNFEPSIY ESEMKPEAIN
301: EGGSHDLDLN LGIATPGHGP KENRGHLQFQ SIPYNMHPGR SSRMETNVNS VIGDPSLKRL VVTEERPSVY STFFPNLERA ERMGIDPSKG VPNWAWQTNG
401: QVNATPVPPF STAASSGFSI SATFPSTAIF PTKSMNPIPQ SFCFTSHSTP CSNAPQFYYE VKSSQAPSQP LSCNTSINGS PPHKF

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.