Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_AchrUn_... | Banana | nucleus | 42.25 | 56.7 |
GSMUA_Achr8P01980_001 | Banana | nucleus | 43.95 | 55.95 |
GSMUA_Achr4P06100_001 | Banana | nucleus | 32.91 | 45.59 |
GSMUA_Achr10P... | Banana | nucleus | 42.25 | 45.02 |
GSMUA_Achr6P33140_001 | Banana | nucleus | 45.22 | 44.65 |
GSMUA_Achr8P18550_001 | Banana | endoplasmic reticulum, nucleus | 34.18 | 44.48 |
GSMUA_Achr11P... | Banana | nucleus | 40.55 | 44.21 |
KRG89074 | Soybean | nucleus | 41.4 | 43.53 |
GSMUA_Achr5P29290_001 | Banana | nucleus | 39.49 | 43.26 |
GSMUA_Achr1P26080_001 | Banana | nucleus | 34.39 | 43.2 |
Bra011939.1-P | Field mustard | nucleus | 41.19 | 42.73 |
CDY04573 | Canola | nucleus | 41.19 | 42.73 |
GSMUA_Achr9P03060_001 | Banana | nucleus | 39.28 | 42.73 |
CDY15760 | Canola | nucleus | 40.76 | 42.29 |
PGSC0003DMT400028706 | Potato | nucleus | 39.92 | 42.25 |
Solyc10g084340.1.1 | Tomato | nucleus | 41.19 | 41.99 |
GSMUA_Achr5P07270_001 | Banana | nucleus | 43.31 | 41.89 |
KRH67634 | Soybean | nucleus | 40.76 | 41.83 |
GSMUA_Achr4P12860_001 | Banana | nucleus | 35.24 | 41.81 |
PGSC0003DMT400071732 | Potato | nucleus | 40.55 | 41.79 |
GSMUA_Achr8P21030_001 | Banana | nucleus | 44.37 | 41.63 |
VIT_06s0004g03590.t01 | Wine grape | nucleus | 44.16 | 41.6 |
GSMUA_Achr9P22540_001 | Banana | nucleus | 32.06 | 41.6 |
CDX95767 | Canola | nucleus | 36.73 | 41.49 |
Bra000487.1-P | Field mustard | nucleus | 36.52 | 41.25 |
AT2G28550.3 | Thale cress | nucleus | 40.55 | 41.16 |
CDX83296 | Canola | nucleus | 37.79 | 40.83 |
KRH24963 | Soybean | nucleus | 42.68 | 40.77 |
KRH22956 | Soybean | nucleus | 40.98 | 40.55 |
KRG95917 | Soybean | mitochondrion | 42.04 | 40.08 |
KRH10362 | Soybean | nucleus | 40.98 | 39.79 |
Solyc09g007260.2.1 | Tomato | nucleus | 38.22 | 39.56 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 13.8 | 39.39 |
GSMUA_Achr6P34420_001 | Banana | nucleus | 39.7 | 39.29 |
GSMUA_Achr3P28340_001 | Banana | nucleus | 36.52 | 39.09 |
Solyc06g075510.2.1 | Tomato | nucleus | 39.28 | 39.03 |
GSMUA_Achr6P02730_001 | Banana | nucleus | 13.38 | 38.18 |
GSMUA_AchrUn_... | Banana | nucleus | 35.46 | 37.95 |
VIT_08s0040g03180.t01 | Wine grape | nucleus | 39.7 | 37.78 |
PGSC0003DMT400016881 | Potato | nucleus | 19.75 | 36.33 |
GSMUA_Achr1P09830_001 | Banana | nucleus | 35.24 | 36.32 |
GSMUA_Achr3P13180_001 | Banana | nucleus | 36.52 | 33.86 |
GSMUA_Achr7P16540_001 | Banana | mitochondrion | 16.14 | 27.64 |
GSMUA_Achr6P30870_001 | Banana | nucleus | 14.01 | 22.37 |
GSMUA_AchrUn_... | Banana | nucleus | 14.65 | 20.06 |
Protein Annotations
MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G04270_001 |
EnsemblPlants:GSMUA_Achr9P04270_001 | EnsemblPlants:GSMUA_Achr9T04270_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0TXD6 | PFAM:PF00847 |
PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | SMART:SM00380 | SUPFAM:SSF54171 |
UniParc:UPI0002966FA2 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G04270_001]
Coordinates
chr9:-:2862187..2864792
Molecular Weight (calculated)
52772.8 Da
IEP (calculated)
8.070
GRAVY (calculated)
-0.377
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRGAMLGL DLASSFDSTS LEAKSGREQM DDSVTTDSSV LDAEDSRSTR PAAAYEFSIL KGYVSGEGEN GDGIGAPQQP GLVTKQLFPL APLPLWMDLT
101: PHQPPTKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AEAAATTYDR AAIRFRGVDA DINFNLSDYE EDLKQIKYLP KVEFVHFLRR
201: QSTRFSRGGS KYRGVTLHKC GRWEARIGQF PGKKYVYLGL FDSEIEAARA YDKAAIKYNG SNAVINFDPS TYEEVISEYV TKADDVDLNL RISQPVVHGP
301: KGNGIHCGAN LKPMMPTEQC TNVFLVDRYI VSDISESVPV CFCLIDSRMQ ESQSSPLQHH QDSQLPKPQL VFLPCKRHLQ QPIISVPLHE LLHHVTVSGT
401: QIIRAQMELQ CGACGHVSYL LCISPTLARI GGTISSIICL QEERRDVYSL FQPKLNVTRH MNHVYVSVAH F
101: PHQPPTKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AEAAATTYDR AAIRFRGVDA DINFNLSDYE EDLKQIKYLP KVEFVHFLRR
201: QSTRFSRGGS KYRGVTLHKC GRWEARIGQF PGKKYVYLGL FDSEIEAARA YDKAAIKYNG SNAVINFDPS TYEEVISEYV TKADDVDLNL RISQPVVHGP
301: KGNGIHCGAN LKPMMPTEQC TNVFLVDRYI VSDISESVPV CFCLIDSRMQ ESQSSPLQHH QDSQLPKPQL VFLPCKRHLQ QPIISVPLHE LLHHVTVSGT
401: QIIRAQMELQ CGACGHVSYL LCISPTLARI GGTISSIICL QEERRDVYSL FQPKLNVTRH MNHVYVSVAH F
001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
Arabidopsis Description
RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.