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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana nucleus 42.25 56.7
GSMUA_Achr8P01980_001 Banana nucleus 43.95 55.95
GSMUA_Achr4P06100_001 Banana nucleus 32.91 45.59
GSMUA_Achr10P... Banana nucleus 42.25 45.02
GSMUA_Achr6P33140_001 Banana nucleus 45.22 44.65
GSMUA_Achr8P18550_001 Banana endoplasmic reticulum, nucleus 34.18 44.48
GSMUA_Achr11P... Banana nucleus 40.55 44.21
KRG89074 Soybean nucleus 41.4 43.53
GSMUA_Achr5P29290_001 Banana nucleus 39.49 43.26
GSMUA_Achr1P26080_001 Banana nucleus 34.39 43.2
Bra011939.1-P Field mustard nucleus 41.19 42.73
CDY04573 Canola nucleus 41.19 42.73
GSMUA_Achr9P03060_001 Banana nucleus 39.28 42.73
CDY15760 Canola nucleus 40.76 42.29
PGSC0003DMT400028706 Potato nucleus 39.92 42.25
Solyc10g084340.1.1 Tomato nucleus 41.19 41.99
GSMUA_Achr5P07270_001 Banana nucleus 43.31 41.89
KRH67634 Soybean nucleus 40.76 41.83
GSMUA_Achr4P12860_001 Banana nucleus 35.24 41.81
PGSC0003DMT400071732 Potato nucleus 40.55 41.79
GSMUA_Achr8P21030_001 Banana nucleus 44.37 41.63
VIT_06s0004g03590.t01 Wine grape nucleus 44.16 41.6
GSMUA_Achr9P22540_001 Banana nucleus 32.06 41.6
CDX95767 Canola nucleus 36.73 41.49
Bra000487.1-P Field mustard nucleus 36.52 41.25
AT2G28550.3 Thale cress nucleus 40.55 41.16
CDX83296 Canola nucleus 37.79 40.83
KRH24963 Soybean nucleus 42.68 40.77
KRH22956 Soybean nucleus 40.98 40.55
KRG95917 Soybean mitochondrion 42.04 40.08
KRH10362 Soybean nucleus 40.98 39.79
Solyc09g007260.2.1 Tomato nucleus 38.22 39.56
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 13.8 39.39
GSMUA_Achr6P34420_001 Banana nucleus 39.7 39.29
GSMUA_Achr3P28340_001 Banana nucleus 36.52 39.09
Solyc06g075510.2.1 Tomato nucleus 39.28 39.03
GSMUA_Achr6P02730_001 Banana nucleus 13.38 38.18
GSMUA_AchrUn_... Banana nucleus 35.46 37.95
VIT_08s0040g03180.t01 Wine grape nucleus 39.7 37.78
PGSC0003DMT400016881 Potato nucleus 19.75 36.33
GSMUA_Achr1P09830_001 Banana nucleus 35.24 36.32
GSMUA_Achr3P13180_001 Banana nucleus 36.52 33.86
GSMUA_Achr7P16540_001 Banana mitochondrion 16.14 27.64
GSMUA_Achr6P30870_001 Banana nucleus 14.01 22.37
GSMUA_AchrUn_... Banana nucleus 14.65 20.06
Protein Annotations
MapMan:15.5.7.3Gene3D:3.30.730.10InterPro:AP2-like_transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sf
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr9G04270_001
EnsemblPlants:GSMUA_Achr9P04270_001EnsemblPlants:GSMUA_Achr9T04270_001InterPro:IPR001471InterPro:IPR036955UniProt:M0TXD6PFAM:PF00847
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR32467PANTHER:PTHR32467:SF46SMART:SM00380SUPFAM:SSF54171
UniParc:UPI0002966FA2SEG:seg::::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G04270_001]
Coordinates
chr9:-:2862187..2864792
Molecular Weight (calculated)
52772.8 Da
IEP (calculated)
8.070
GRAVY (calculated)
-0.377
Length
471 amino acids
Sequence
(BLAST)
001: MSRRGAMLGL DLASSFDSTS LEAKSGREQM DDSVTTDSSV LDAEDSRSTR PAAAYEFSIL KGYVSGEGEN GDGIGAPQQP GLVTKQLFPL APLPLWMDLT
101: PHQPPTKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AEAAATTYDR AAIRFRGVDA DINFNLSDYE EDLKQIKYLP KVEFVHFLRR
201: QSTRFSRGGS KYRGVTLHKC GRWEARIGQF PGKKYVYLGL FDSEIEAARA YDKAAIKYNG SNAVINFDPS TYEEVISEYV TKADDVDLNL RISQPVVHGP
301: KGNGIHCGAN LKPMMPTEQC TNVFLVDRYI VSDISESVPV CFCLIDSRMQ ESQSSPLQHH QDSQLPKPQL VFLPCKRHLQ QPIISVPLHE LLHHVTVSGT
401: QIIRAQMELQ CGACGHVSYL LCISPTLARI GGTISSIICL QEERRDVYSL FQPKLNVTRH MNHVYVSVAH F
Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)
001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
Arabidopsis Description
RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.