Factsheet for GSMUA_Achr6P02730_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	88.48	88.48
Zm00001d024468_P003	Maize	nucleus	70.91	40.34
HORVU7Hr1G070230.12	Barley	nucleus	67.27	37.37
KXG24541	Sorghum	nucleus	70.91	36.91
GSMUA_Achr7P16540_001	Banana	mitochondrion	59.39	35.64
TraesCS7D01G292500.1	Wheat	plastid	67.88	31.91
TraesCS7B01G186900.1	Wheat	nucleus	67.88	31.73
TraesCS7A01G292900.1	Wheat	plastid	67.88	28.94
GSMUA_Achr6P30870_001	Banana	nucleus	47.88	26.78
GSMUA_AchrUn_...	Banana	nucleus	40.61	19.09
GSMUA_Achr8P01980_001	Banana	nucleus	41.21	18.38
GSMUA_Achr4P06100_001	Banana	nucleus	37.58	18.24
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	40.0	18.23
GSMUA_Achr1P26080_001	Banana	nucleus	40.61	17.87
GSMUA_Achr9P22540_001	Banana	nucleus	35.15	15.98
GSMUA_Achr11P...	Banana	nucleus	40.0	15.28
GSMUA_Achr10P...	Banana	nucleus	40.61	15.16
GSMUA_Achr4P12860_001	Banana	nucleus	36.36	15.11
GSMUA_Achr9P03060_001	Banana	nucleus	38.79	14.78
GSMUA_AchrUn_...	Banana	nucleus	39.39	14.77
GSMUA_AchrUn_...	Banana	nucleus	30.3	14.53
GSMUA_Achr6P33140_001	Banana	nucleus	41.21	14.26
GSMUA_Achr5P29290_001	Banana	nucleus	36.97	14.19
GSMUA_Achr3P28340_001	Banana	nucleus	37.58	14.09
GSMUA_Achr1P09830_001	Banana	nucleus	38.79	14.0
GSMUA_Achr5P07270_001	Banana	nucleus	40.61	13.76
GSMUA_Achr9P04270_001	Banana	nucleus	38.18	13.38
GSMUA_Achr8P21030_001	Banana	nucleus	40.61	13.35
GSMUA_Achr6P34420_001	Banana	nucleus	37.58	13.03
GSMUA_Achr3P13180_001	Banana	nucleus	38.79	12.6

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr6G02730_001	EnsemblPlants:GSMUA_Achr6P02730_001	EnsemblPlants:GSMUA_Achr6T02730_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0T3M1
PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002952753	SEG:seg	:	:

Description

AP2-like ethylene-responsive transcription factor AIL5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02730_001]

Coordinates

chr6:-:1781880..1783202

Molecular Weight (calculated)

18462.7 Da

IEP (calculated)

5.834

GRAVY (calculated)

-0.488

Length

165 amino acids

Sequence
(BLAST)

001: MIIANGCCNG CASVYLGSYV SEEMAARAHD LAALKYWGPG PATKLNFPVS DYENELENMK TMSQEEFVAY VRRKSSCFSR GASVYRGVTR RRKDGKWQAR
101: IGRVGDLKDA KDIYLGTFDT EEEAAEAYDI AAIQLRGVHA VTNFDLSNYC EGGTRRPDDS FRLEM

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.