Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P06100_001 | Banana | nucleus | 53.72 | 57.35 |
| GSMUA_Achr3P28340_001 | Banana | nucleus | 67.49 | 55.68 |
| GSMUA_Achr4P12860_001 | Banana | nucleus | 55.92 | 51.13 |
| GSMUA_Achr1P26080_001 | Banana | nucleus | 51.52 | 49.87 |
| AT5G67180.1 | Thale cress | nucleus | 46.01 | 47.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.35 | 45.87 |
| CDY01432 | Canola | nucleus | 45.18 | 45.56 |
| CDY12814 | Canola | nucleus | 45.18 | 45.43 |
| Bra012139.1-P | Field mustard | nucleus | 44.9 | 45.28 |
| GSMUA_Achr8P18550_001 | Banana | endoplasmic reticulum, nucleus | 44.63 | 44.75 |
| GSMUA_Achr8P01980_001 | Banana | nucleus | 44.9 | 44.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.86 | 41.14 |
| GSMUA_Achr1P09830_001 | Banana | nucleus | 50.69 | 40.26 |
| GSMUA_Achr3P13180_001 | Banana | nucleus | 52.62 | 37.6 |
| GSMUA_Achr9P03060_001 | Banana | nucleus | 44.35 | 37.18 |
| GSMUA_Achr5P29290_001 | Banana | nucleus | 43.8 | 36.98 |
| GSMUA_Achr11P... | Banana | nucleus | 42.98 | 36.11 |
| GSMUA_Achr10P... | Banana | nucleus | 43.8 | 35.97 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 16.25 | 35.76 |
| GSMUA_Achr6P33140_001 | Banana | nucleus | 46.28 | 35.22 |
| GSMUA_Achr6P02730_001 | Banana | nucleus | 15.98 | 35.15 |
| GSMUA_Achr5P07270_001 | Banana | nucleus | 43.8 | 32.65 |
| GSMUA_Achr9P04270_001 | Banana | nucleus | 41.6 | 32.06 |
| GSMUA_Achr6P34420_001 | Banana | nucleus | 41.87 | 31.93 |
| GSMUA_Achr8P21030_001 | Banana | nucleus | 43.53 | 31.47 |
| GSMUA_Achr7P16540_001 | Banana | mitochondrion | 18.73 | 24.73 |
| GSMUA_Achr6P30870_001 | Banana | nucleus | 16.53 | 20.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.53 | 17.44 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G22540_001 |
| EnsemblPlants:GSMUA_Achr9P22540_001 | EnsemblPlants:GSMUA_Achr9T22540_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0U2L3 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF18 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0002950B28 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G22540_001]
Coordinates
chr9:+:27654024..27656644
Molecular Weight (calculated)
39891.4 Da
IEP (calculated)
5.721
GRAVY (calculated)
-0.587
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGWDLNDA VSEEDSCCLM ASAPAEDGGD DEKGKPAATS SGEVENDDSG TSVVDVEAFG GSAGKVFEFS VSGRRSVQSG PTVATHQFFP LGHSEGARAG
101: GSSAPPSPRV HWTGDGFWQS SEPVVAGMAT EAQPPVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGIALT FRDCSSRAYD RAAIKFRGVD
201: ADINFRLDDY EEDIQQMGNL NKEDFIQVLR RQSGSFPRGS SKFRGVILRK SGKWEARMGQ ILGKKYVYLG LFDTEIEAAR AYDTAAIKCN GKDAITNFDP
301: KLYSNELGIE TDHVEHNLDL SLGRSGSKRI NLEMIDDESS SVVDQQFLIG SESERKHNMI LKV
101: GSSAPPSPRV HWTGDGFWQS SEPVVAGMAT EAQPPVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGIALT FRDCSSRAYD RAAIKFRGVD
201: ADINFRLDDY EEDIQQMGNL NKEDFIQVLR RQSGSFPRGS SKFRGVILRK SGKWEARMGQ ILGKKYVYLG LFDTEIEAAR AYDTAAIKCN GKDAITNFDP
301: KLYSNELGIE TDHVEHNLDL SLGRSGSKRI NLEMIDDESS SVVDQQFLIG SESERKHNMI LKV
001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
Arabidopsis Description
TOE3AP2-like ethylene-responsive transcription factor TOE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.