Factsheet for Bra012139.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01432	Canola	nucleus	99.72	99.72
CDY12814	Canola	nucleus	98.33	98.06
AT5G67180.1	Thale cress	nucleus	76.67	78.41
GSMUA_Achr4P06100_001	Banana	nucleus	48.89	51.76
Bra011741.1-P	Field mustard	nucleus	56.67	47.11
Bra017809.1-P	Field mustard	nucleus	56.39	46.99
GSMUA_Achr1P26080_001	Banana	nucleus	47.5	45.6
GSMUA_Achr9P22540_001	Banana	nucleus	45.28	44.9
GSMUA_Achr4P12860_001	Banana	nucleus	48.89	44.33
GSMUA_Achr3P28340_001	Banana	nucleus	49.72	40.68
GSMUA_AchrUn_...	Banana	nucleus	48.06	39.32
Bra011939.1-P	Field mustard	nucleus	48.89	38.77
GSMUA_Achr1P09830_001	Banana	nucleus	48.33	38.07
GSMUA_Achr3P13180_001	Banana	nucleus	50.83	36.02
Bra007123.1-P	Field mustard	nucleus	33.89	35.57
Bra000487.1-P	Field mustard	nucleus	41.11	35.49
Bra002510.1-P	Field mustard	nucleus	38.89	30.97
Bra020262.1-P	Field mustard	nucleus	36.39	30.54
Bra004641.1-P	Field mustard	nucleus	21.67	18.84
Bra000237.1-P	Field mustard	nucleus	22.78	17.71

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra012139
EnsemblPlants:Bra012139.1	EnsemblPlants:Bra012139.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D6N0	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00025416F8	SEG:seg	:	:	:	:

Description

AT5G67180 (E=3e-134) TOE3 | AP2 domain-containing transcription factor, putative

Coordinates

chrA07:+:9826234..9828218

Molecular Weight (calculated)

40736.6 Da

IEP (calculated)

9.053

GRAVY (calculated)

-0.798

Length

360 amino acids

Sequence
(BLAST)

001: MWNLNDSPDH HEESDGRWKR AGDVPISMRS STTCLLSVPP VTRNFFPSQI MEQEVPGISG SGITRNQCLV RSDPSGSGRP ENLELEITPP VKKSRRGPRS
101: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAVKF RGVDADINFN IEDYVEDLKQ MSSLTKEEFM HVIRRQSTGF PRGSSKYRGV
201: TLHKCGRWEA RLGQFLNKKY VYLGLFDTEM EAARAYDKAA IKSNGKDAVT NFDPKVYEEQ HNSPEKQWDD HNLDLSLVES NSEEFGTKSE TASMRNGFRD
301: EERLLGSHLS LAMTTTATVG SEKPLDGGGK RVGMAASSGF SPRFPPWNHH TPRTFHFFRP

Best Arabidopsis Sequence Match ( AT5G67180.1 )
(BLAST)

001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP

Arabidopsis Description

TOE3AP2-like ethylene-responsive transcription factor TOE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.