Factsheet for Bra020262.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09223	Canola	nucleus	96.27	95.82
Bra002510.1-P	Field mustard	nucleus	78.79	74.78
AT5G60120.2	Thale cress	nucleus	83.68	70.81
Bra000487.1-P	Field mustard	nucleus	40.33	41.49
Bra011939.1-P	Field mustard	nucleus	42.42	40.09
Solyc04g049800.2.1	Tomato	nucleus	36.6	39.45
Bra007123.1-P	Field mustard	nucleus	31.0	38.78
PGSC0003DMT400031401	Potato	nucleus	36.13	38.08
Bra012139.1-P	Field mustard	nucleus	30.54	36.39
KRH70384	Soybean	nucleus	34.27	35.34
KRH33335	Soybean	nucleus	33.57	34.87
VIT_13s0019g03550.t01	Wine grape	nucleus	40.33	34.81
Zm00001d010987_P001	Maize	nucleus	31.0	34.46
Bra011741.1-P	Field mustard	nucleus	34.5	34.18
OQU77289	Sorghum	nucleus	34.73	34.1
Bra017809.1-P	Field mustard	nucleus	33.33	33.1
Os05t0121600-01	Rice	nucleus	39.39	33.01
Zm00001d035512_P001	Maize	nucleus	39.16	32.88
TraesCS1B01G076300.1	Wheat	nucleus	38.0	31.84
TraesCS1A01G058400.1	Wheat	nucleus	37.76	31.76
HORVU1Hr1G011800.4	Barley	nucleus	38.0	31.71
TraesCS1D01G059200.1	Wheat	nucleus	37.76	31.7
Bra004641.1-P	Field mustard	nucleus	20.28	21.01
Bra000237.1-P	Field mustard	nucleus	20.05	18.57

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra020262
EnsemblPlants:Bra020262.1	EnsemblPlants:Bra020262.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DUR9	PFAM:PF00847
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF46	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002543591
SEG:seg	:	:	:	:	:

Description

AT5G60120 (E=2e-128) TOE2 | TOE2; DNA binding / transcription factor

Coordinates

chrA02:-:5918805..5920800

Molecular Weight (calculated)

47208.2 Da

IEP (calculated)

8.333

GRAVY (calculated)

-0.600

Length

429 amino acids

Sequence
(BLAST)

001: MLDLNLDVVS AESTQMDESV TSNSSVVNAE ASSCIDGEEE LCSTRAAVKF QFEILKGRGG EEEEEDRKTK EFFPVAQSSR SSVDISFQRG TQGGDFVQPP
101: PAQPVKKSRR GPRSKSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA AVKFRGLEAD INFIISDYEE DLKQMANLSK EEVVQVLRRQ
201: SSGFSRSNSR YQGVALQKNG GWGAQMKQFN GNMAVASLIE PHASRIIPEA ANVKLDLSLG ISISLGDGPK QKDKAPRLHH PPNSMMDNHM AAATCDTPFN
301: LLKRASDHLI NRHVLHPSAF FSPMERTPEK GFMSPSPQSY LARTWQAQDQ FSGGTATAAI ASPLYSNAAS SGFSPSATRP PPSSTASATL HPSQPFFNLN
401: MPSLYVIHPS DYASQQQHHH LMNRSQPPP

Best Arabidopsis Sequence Match ( AT5G60120.6 )
(BLAST)

001: MLDLNLDVDS TESTQNERDS ITVKGVSLNQ MDESVTSNSS VVNAEASSCI DGEDELCSTR TVKFQFEILK GGGEEEEEDD DERSAVMMTK EFFPVAKGMN
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSM ENHMAAAACD TPFNFLKRGS DHLNNRHALP SAFFSPMERT PEKGLMLRSH QSFPARTWQG
401: HDQSSGGTAV AATAPPLFSN AASSGFSLSA TRPPSSTAIH HPSQPFVNLN QPGLYVIHPS DYISQHQHNL MNRPQPPP

Arabidopsis Description

TOE2Target of early activation tagged (EAT) 2 [Source:UniProtKB/TrEMBL;Acc:F4JXG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.