CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020262.1-P	Field mustard	nucleus	95.82	96.27
CDX80199	Canola	nucleus	79.81	75.77
CDY31576	Canola	nucleus	79.35	75.66
AT5G60120.2	Thale cress	nucleus	83.06	70.61
CDX95767	Canola	nucleus	41.07	42.45
CDY15760	Canola	nucleus	42.69	40.53
CDY04573	Canola	nucleus	42.23	40.09
Solyc04g049800.2.1	Tomato	nucleus	36.66	39.7
CDX83296	Canola	nucleus	40.14	39.68
CDY68119	Canola	nucleus	30.63	38.48
PGSC0003DMT400031401	Potato	nucleus	36.19	38.33
CDY07510	Canola	nucleus	28.77	37.8
CDX73419	Canola	nucleus	29.93	37.5
CDY12814	Canola	nucleus	31.09	37.12
CDY01432	Canola	nucleus	30.63	36.67
KRH70384	Soybean	nucleus	34.34	35.58
KRH33335	Soybean	nucleus	33.64	35.11
VIT_13s0019g03550.t01	Wine grape	nucleus	40.14	34.81
CDX69282	Canola	nucleus	32.02	34.5
Zm00001d010987_P001	Maize	nucleus	30.86	34.46
CDY62228	Canola	nucleus	34.11	34.11
OQU77289	Sorghum	nucleus	34.34	33.87
CDY29538	Canola	nucleus	33.64	33.56
Os05t0121600-01	Rice	nucleus	38.98	32.81
Zm00001d035512_P001	Maize	nucleus	38.52	32.49
TraesCS1B01G076300.1	Wheat	nucleus	37.59	31.64
TraesCS1A01G058400.1	Wheat	nucleus	37.35	31.57
TraesCS1D01G059200.1	Wheat	nucleus	37.35	31.51
HORVU1Hr1G011800.4	Barley	nucleus	37.35	31.32
CDY71179	Canola	nucleus	13.46	25.55
CDY19560	Canola	nucleus	6.03	25.24
CDY71282	Canola	nucleus	13.46	24.89
CDY23833	Canola	nucleus	20.19	20.47
CDY22537	Canola	nucleus	19.72	19.86
CDY71682	Canola	nucleus	9.51	19.81
CDX79921	Canola	nucleus	19.72	19.72
CDY35402	Canola	nucleus	18.1	18.98

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	GO:A0A078FBF9	UniProt:A0A078FBF9	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EnsemblPlants:CDY09223	ProteinID:CDY09223	ProteinID:CDY09223.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00001475001	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF46	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0004EF3928	SEG:seg	:	:	:

Description

BnaA02g06490DBnaA02g06490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBF9]

Coordinates

chrLK031993:-:810096..812376

Molecular Weight (calculated)

47494.6 Da

IEP (calculated)

8.600

GRAVY (calculated)

-0.633

Length

431 amino acids

Sequence
(BLAST)

001: MMLDLNLDVV SAESTHMDES VTSNSSVVNA EASSCIDGEE ELCSTRAAVK FQFEILKGRG GEEEEEDRKT KEFFPVAQSS RSSVDISFQR GTQGGDFVQP
101: PPAQPVKKSR RGPRSKSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAVKFRGLEA DINFIISDYE EDLKQMANLS KEEVVQVLRR
201: QSSGFSRSNS RYQGVSLQKI GGWGAQMKQF NGNMAVASLI EPHASRIIPE SANVKLDLSL GISLSLGDGP KQKDKAPRRH HPPNSMMDNH MTAATCDTPF
301: NLLKRGSDHL LNRHVPHPSA FFSPMERTPE KGFMSPSPQS FLARTWQAQD QFSGGTATTA IASPLYSNAA SSGFSPSATR PPPSSTASAT LHPSQPFLNL
401: NMPGLYVIHP SDYSSQQHHH HLMNRSQPPP P

Best Arabidopsis Sequence Match ( AT5G60120.6 )
(BLAST)

001: MLDLNLDVDS TESTQNERDS ITVKGVSLNQ MDESVTSNSS VVNAEASSCI DGEDELCSTR TVKFQFEILK GGGEEEEEDD DERSAVMMTK EFFPVAKGMN
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSM ENHMAAAACD TPFNFLKRGS DHLNNRHALP SAFFSPMERT PEKGLMLRSH QSFPARTWQG
401: HDQSSGGTAV AATAPPLFSN AASSGFSLSA TRPPSSTAIH HPSQPFVNLN QPGLYVIHPS DYISQHQHNL MNRPQPPP

Arabidopsis Description

TOE2Target of early activation tagged (EAT) 2 [Source:UniProtKB/TrEMBL;Acc:F4JXG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.