Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000487.1-P | Field mustard | nucleus | 93.58 | 97.84 |
| CDX95767 | Canola | nucleus | 90.83 | 94.96 |
| CDY04573 | Canola | nucleus | 80.5 | 77.31 |
| CDY15760 | Canola | nucleus | 80.28 | 77.09 |
| AT2G28550.3 | Thale cress | nucleus | 79.13 | 74.35 |
| CDY19560 | Canola | nucleus | 16.28 | 68.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.89 | 53.28 |
| GSMUA_Achr8P01980_001 | Banana | nucleus | 39.45 | 46.49 |
| GSMUA_Achr10P... | Banana | nucleus | 44.04 | 43.44 |
| Solyc09g007260.2.1 | Tomato | nucleus | 45.18 | 43.3 |
| KRH22956 | Soybean | nucleus | 47.25 | 43.28 |
| CDY12814 | Canola | nucleus | 35.55 | 42.94 |
| Solyc10g084340.1.1 | Tomato | nucleus | 45.41 | 42.86 |
| CDY01432 | Canola | nucleus | 35.32 | 42.78 |
| PGSC0003DMT400071732 | Potato | nucleus | 44.72 | 42.67 |
| GSMUA_Achr9P03060_001 | Banana | nucleus | 42.2 | 42.49 |
| KRH10362 | Soybean | nucleus | 47.25 | 42.47 |
| PGSC0003DMT400028706 | Potato | nucleus | 43.35 | 42.47 |
| GSMUA_Achr6P33140_001 | Banana | nucleus | 46.1 | 42.14 |
| CDX69282 | Canola | nucleus | 38.53 | 42.0 |
| CDY68119 | Canola | nucleus | 33.03 | 41.98 |
| CDY07510 | Canola | nucleus | 31.42 | 41.77 |
| GSMUA_Achr11P... | Banana | nucleus | 41.05 | 41.44 |
| GSMUA_Achr5P29290_001 | Banana | nucleus | 40.83 | 41.4 |
| CDX73419 | Canola | nucleus | 32.57 | 41.28 |
| CDY62228 | Canola | nucleus | 40.37 | 40.84 |
| CDY09223 | Canola | nucleus | 39.68 | 40.14 |
| CDY29538 | Canola | nucleus | 39.68 | 40.05 |
| CDY31576 | Canola | nucleus | 41.51 | 40.04 |
| GSMUA_Achr6P34420_001 | Banana | nucleus | 43.35 | 39.71 |
| CDX80199 | Canola | nucleus | 41.05 | 39.43 |
| GSMUA_Achr5P07270_001 | Banana | nucleus | 43.81 | 39.22 |
| GSMUA_Achr8P21030_001 | Banana | nucleus | 44.5 | 38.65 |
| GSMUA_Achr9P04270_001 | Banana | nucleus | 40.83 | 37.79 |
| CDY71179 | Canola | nucleus | 18.58 | 35.68 |
| CDY71282 | Canola | nucleus | 18.81 | 35.19 |
| CDY23833 | Canola | nucleus | 21.56 | 22.12 |
| CDY22537 | Canola | nucleus | 21.33 | 21.73 |
| CDY35402 | Canola | nucleus | 20.18 | 21.41 |
| CDX79921 | Canola | nucleus | 21.1 | 21.35 |
| CDY71682 | Canola | nucleus | 9.17 | 19.32 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078D1Q3 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX83296 | ProteinID:CDX83296 | ProteinID:CDX83296.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00138851001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EE61BA | SEG:seg | : | : | : |
Description
BnaA03g22100D
Coordinates
chrLK031832:-:895119..897751
Molecular Weight (calculated)
47785.0 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.716
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLDLNLDAD SPESTQYGDS NADRQTSDGS GNRVDESGTS TSSVINADAD DDSCSARAFT HSFDILKVGG GGGDESTASI SGVTKELFPV AGDCGKLRGW
101: SSRSWMDLSV GTKSVAPAPA PAQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFTVGDYEED
201: MKQVQNLSKE EFVHILRRQS TGFSRGSSKY RGVTLHKCGK WEAGMGQLLA KNKWYDFVSL SEHLLLENRA YNKAAISSNG REAVANFEHS TYQKEINSES
301: GHDKIDLNLG ISLSPGNAVK QNGRLSHFPS NPYETPPGVS LTIDTEFMGK PVNTHLPYGS SDHRANFEEN ISEAEGGMMS NWGWHRPGQT STMRPQQPGA
401: QPPQLFSVAA ASSGFSNFRQ QPPSENASHG YFYPQF
101: SSRSWMDLSV GTKSVAPAPA PAQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFTVGDYEED
201: MKQVQNLSKE EFVHILRRQS TGFSRGSSKY RGVTLHKCGK WEAGMGQLLA KNKWYDFVSL SEHLLLENRA YNKAAISSNG REAVANFEHS TYQKEINSES
301: GHDKIDLNLG ISLSPGNAVK QNGRLSHFPS NPYETPPGVS LTIDTEFMGK PVNTHLPYGS SDHRANFEEN ISEAEGGMMS NWGWHRPGQT STMRPQQPGA
401: QPPQLFSVAA ASSGFSNFRQ QPPSENASHG YFYPQF
001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP
Arabidopsis Description
RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.