Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002510.1-P | Field mustard | nucleus | 92.73 | 93.14 |
| CDY31576 | Canola | nucleus | 92.73 | 93.14 |
| CDY09223 | Canola | nucleus | 75.77 | 79.81 |
| CDX95767 | Canola | nucleus | 40.31 | 43.88 |
| CDY15760 | Canola | nucleus | 41.19 | 41.19 |
| CDX83296 | Canola | nucleus | 39.43 | 41.05 |
| CDY04573 | Canola | nucleus | 40.97 | 40.97 |
| Solyc04g049800.2.1 | Tomato | nucleus | 35.46 | 40.45 |
| CDY68119 | Canola | nucleus | 30.4 | 40.23 |
| CDY07510 | Canola | nucleus | 28.85 | 39.94 |
| PGSC0003DMT400031401 | Potato | nucleus | 35.68 | 39.8 |
| CDX73419 | Canola | nucleus | 29.74 | 39.24 |
| CDY12814 | Canola | nucleus | 31.06 | 39.06 |
| VIT_13s0019g03550.t01 | Wine grape | nucleus | 42.29 | 38.63 |
| CDY01432 | Canola | nucleus | 30.62 | 38.61 |
| Zm00001d010987_P001 | Maize | nucleus | 31.06 | 36.53 |
| CDX69282 | Canola | nucleus | 32.16 | 36.5 |
| OQU77289 | Sorghum | nucleus | 34.58 | 35.93 |
| CDY62228 | Canola | nucleus | 33.7 | 35.5 |
| Os05t0121600-01 | Rice | nucleus | 39.43 | 34.96 |
| CDY29538 | Canola | nucleus | 33.26 | 34.95 |
| KRH70384 | Soybean | nucleus | 31.5 | 34.38 |
| Zm00001d035512_P001 | Maize | nucleus | 37.89 | 33.66 |
| KRH33335 | Soybean | nucleus | 30.62 | 33.66 |
| TraesCS1B01G076300.1 | Wheat | nucleus | 37.89 | 33.59 |
| HORVU1Hr1G011800.4 | Barley | nucleus | 37.89 | 33.46 |
| TraesCS1A01G058400.1 | Wheat | nucleus | 37.44 | 33.33 |
| TraesCS1D01G059200.1 | Wheat | nucleus | 37.44 | 33.27 |
| CDY71179 | Canola | nucleus | 14.1 | 28.19 |
| CDY71282 | Canola | nucleus | 13.88 | 27.04 |
| CDY19560 | Canola | nucleus | 5.29 | 23.3 |
| CDY23833 | Canola | nucleus | 19.38 | 20.71 |
| CDY71682 | Canola | nucleus | 9.25 | 20.29 |
| CDX79921 | Canola | nucleus | 18.94 | 19.95 |
| CDY22537 | Canola | nucleus | 18.72 | 19.86 |
| CDY35402 | Canola | nucleus | 17.4 | 19.22 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078CVZ1 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX80199 | ProteinID:CDX80199 | ProteinID:CDX80199.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00133140001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EAF453 | SEG:seg | : | : | : |
Description
BnaC09g35430D
Coordinates
chrLK031820:-:423183..426669
Molecular Weight (calculated)
49634.9 Da
IEP (calculated)
7.989
GRAVY (calculated)
-0.625
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLNLDVDS KEVSGAVLNQ MDESVTSNSS LVNAEASSCI DGEEELCSTP AVKFQFEILK GGGREDEEGR SEVMTKEFFP IEKGASFGDS SGQSSRSSVD
101: ISFQRGNQGR DAARVMQPPA QPVKKSRRGP RSKSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAV KFRGLEADIN FVISDYEEDL
201: KQMANLAKEE VVQVLRRQSS GFSRNNSRYQ GANLPKIGGW GGAQMEQLNG NMAYDKAIAT KWNGREAASL IEPHAPRIIP AAANAKLDLN LGISLSLGDS
301: PKQNLNNVVC GRNSKMENHM AASTCDTPFN FLKRGSDHLI NRHVHPSAFF SPMERTPKEG FMPRSPQSFP ARTWQPQDQP SGGTATTATA TPLLSNAASS
401: GFSHSATHPP SSSTATLHPS LPFLNLNMPG LYVIHPSEYA SHHHHDINRS QPPP
101: ISFQRGNQGR DAARVMQPPA QPVKKSRRGP RSKSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAV KFRGLEADIN FVISDYEEDL
201: KQMANLAKEE VVQVLRRQSS GFSRNNSRYQ GANLPKIGGW GGAQMEQLNG NMAYDKAIAT KWNGREAASL IEPHAPRIIP AAANAKLDLN LGISLSLGDS
301: PKQNLNNVVC GRNSKMENHM AASTCDTPFN FLKRGSDHLI NRHVHPSAFF SPMERTPKEG FMPRSPQSFP ARTWQPQDQP SGGTATTATA TPLLSNAASS
401: GFSHSATHPP SSSTATLHPS LPFLNLNMPG LYVIHPSEYA SHHHHDINRS QPPP
001: MLDLNLDVDS TESTQNERDS ITVKGVSLNQ MDESVTSNSS VVNAEASSCI DGEDELCSTR TVKFQFEILK GGGEEEEEDD DERSAVMMTK EFFPVAKGMN
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSV CGRNTMMENH MAAAACDTPF NFLKRGSDHL NNRHALPSAF FSPMERTPEK GLMLRSHQSF
401: PARTWQGHDQ SSGGTAVAAT APPLFSNAAS SGFSLSATRP PSSTAIHHPS QPFVNLNQPG LYVIHPSDYI SQHQHNLMNR PQPPP
101: FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
201: RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
301: IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSV CGRNTMMENH MAAAACDTPF NFLKRGSDHL NNRHALPSAF FSPMERTPEK GLMLRSHQSF
401: PARTWQGHDQ SSGGTAVAAT APPLFSNAAS SGFSLSATRP PSSTAIHHPS QPFVNLNQPG LYVIHPSDYI SQHQHNLMNR PQPPP
Arabidopsis Description
TOE2Target of early activation tagged (EAT) 2 [Source:UniProtKB/TrEMBL;Acc:F4JXG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.