Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68119 | Canola | nucleus | 83.23 | 79.59 |
| AT3G54990.1 | Thale cress | nucleus | 82.32 | 78.03 |
| CDX73419 | Canola | nucleus | 81.71 | 77.91 |
| CDY01432 | Canola | nucleus | 36.28 | 33.06 |
| CDY12814 | Canola | nucleus | 36.28 | 32.96 |
| CDX95767 | Canola | nucleus | 41.16 | 32.37 |
| CDX83296 | Canola | nucleus | 41.77 | 31.42 |
| CDY15760 | Canola | nucleus | 42.99 | 31.06 |
| CDY62228 | Canola | nucleus | 40.24 | 30.63 |
| CDY04573 | Canola | nucleus | 42.38 | 30.62 |
| CDX69282 | Canola | nucleus | 37.2 | 30.5 |
| VIT_13s0019g03550.t01 | Wine grape | nucleus | 46.04 | 30.38 |
| CDY29538 | Canola | nucleus | 39.94 | 30.32 |
| Zm00001d010987_P001 | Maize | nucleus | 35.37 | 30.05 |
| CDY31576 | Canola | nucleus | 40.24 | 29.2 |
| CDX80199 | Canola | nucleus | 39.94 | 28.85 |
| OQU77289 | Sorghum | nucleus | 38.41 | 28.83 |
| CDY09223 | Canola | nucleus | 37.8 | 28.77 |
| TraesCS1B01G076300.1 | Wheat | nucleus | 42.99 | 27.54 |
| Zm00001d035512_P001 | Maize | nucleus | 42.68 | 27.4 |
| TraesCS1D01G059200.1 | Wheat | nucleus | 42.68 | 27.4 |
| TraesCS1A01G058400.1 | Wheat | nucleus | 42.38 | 27.25 |
| HORVU1Hr1G011800.4 | Barley | nucleus | 42.68 | 27.24 |
| Os05t0121600-01 | Rice | nucleus | 41.46 | 26.56 |
| CDY71179 | Canola | nucleus | 15.85 | 22.91 |
| CDY71282 | Canola | nucleus | 15.55 | 21.89 |
| CDY22537 | Canola | nucleus | 22.56 | 17.29 |
| CDY23833 | Canola | nucleus | 22.26 | 17.18 |
| CDX79921 | Canola | nucleus | 21.95 | 16.71 |
| CDY35402 | Canola | nucleus | 20.73 | 16.55 |
| CDY71682 | Canola | nucleus | 10.37 | 16.43 |
| CDY19560 | Canola | nucleus | 3.35 | 10.68 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078EZI9 | UniProt:A0A078EZI9 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY07510 | ProteinID:CDY07510 | ProteinID:CDY07510.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00124534001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF46 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EDCC9B | SEG:seg | : | : | : |
Description
BnaC06g15540DBnaC06g15540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZI9]
Coordinates
chrLK031979:+:147526..151554
Molecular Weight (calculated)
36792.2 Da
IEP (calculated)
9.469
GRAVY (calculated)
-0.563
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLNLGTFS YYQEDHDRRV PLISTAGEEE SNLSLSSSSS TDSATDKPFI TFGILKRDGD VVPLKEAEGL FPVVDARPNI EFSGDDRHWL NLSSLHRSNQ
101: QMVKKGRRGP RSRSSHYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAYA AARAYDRAAI KFRGLDADIN FVVDDYRQDM DKMKNLDKVE FVQTIRRESA
201: SFGRGSSKYK GLTLQKCTQF KNHHDQIHLF QNRGWDAAAI KYNELGKGVM KFGSHIKGNA HSDLELSLGI SSSSGNTKLT TSDYYKQSSI YLPVMTTMNT
301: LKTVAASSGF PFITMTTSSS SISTCFGP
101: QMVKKGRRGP RSRSSHYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAYA AARAYDRAAI KFRGLDADIN FVVDDYRQDM DKMKNLDKVE FVQTIRRESA
201: SFGRGSSKYK GLTLQKCTQF KNHHDQIHLF QNRGWDAAAI KYNELGKGVM KFGSHIKGNA HSDLELSLGI SSSSGNTKLT TSDYYKQSSI YLPVMTTMNT
301: LKTVAASSGF PFITMTTSSS SISTCFGP
001: MLDLNLKIFS SYNEDQDRKV PLMISTTGEE ESNSSSSSTT DSAARDAFIA FGILKRDDDL VPPPPPPPHK ETGDLFPVVA DARRNIEFSV EDSHWLNLSS
101: LQRNTQKMVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAYAAARA YDRAAIKFRG LDADINFVVD DYRHDIDKMK NLNKVEFVQT
201: LRRESASFGR GSSKYKGLAL QKCTQFKTHD QIHLFQNRGW DAAAIKYNEL GKGEGAMKFG AHIKGNGHND LELSLGISSS SESIKLTTGD YYKGINRSTM
301: GLYGKQSSIF LPMATMKPLK TVAASSGFPF ISMTSSSSSM SNCFDP
101: LQRNTQKMVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAYAAARA YDRAAIKFRG LDADINFVVD DYRHDIDKMK NLNKVEFVQT
201: LRRESASFGR GSSKYKGLAL QKCTQFKTHD QIHLFQNRGW DAAAIKYNEL GKGEGAMKFG AHIKGNGHND LELSLGISSS SESIKLTTGD YYKGINRSTM
301: GLYGKQSSIF LPMATMKPLK TVAASSGFPF ISMTSSSSSM SNCFDP
Arabidopsis Description
SMZAP2-like ethylene-responsive transcription factor SMZ [Source:UniProtKB/Swiss-Prot;Acc:Q6PV68]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.