Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012139.1-P | Field mustard | nucleus | 99.72 | 99.72 |
| CDY12814 | Canola | nucleus | 98.61 | 98.34 |
| AT5G67180.1 | Thale cress | nucleus | 76.94 | 78.69 |
| GSMUA_Achr4P06100_001 | Banana | nucleus | 49.17 | 52.06 |
| CDX69282 | Canola | nucleus | 54.44 | 49.0 |
| CDY29538 | Canola | nucleus | 56.67 | 47.22 |
| CDY62228 | Canola | nucleus | 56.39 | 47.1 |
| CDY71179 | Canola | nucleus | 29.17 | 46.26 |
| CDY71282 | Canola | nucleus | 29.72 | 45.92 |
| GSMUA_Achr1P26080_001 | Banana | nucleus | 47.5 | 45.6 |
| GSMUA_Achr9P22540_001 | Banana | nucleus | 45.56 | 45.18 |
| GSMUA_Achr4P12860_001 | Banana | nucleus | 49.17 | 44.58 |
| GSMUA_Achr3P28340_001 | Banana | nucleus | 50.0 | 40.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.33 | 39.55 |
| CDY04573 | Canola | nucleus | 49.17 | 38.99 |
| CDY15760 | Canola | nucleus | 49.17 | 38.99 |
| GSMUA_Achr1P09830_001 | Banana | nucleus | 48.61 | 38.29 |
| CDX95767 | Canola | nucleus | 42.5 | 36.69 |
| CDY07510 | Canola | nucleus | 33.06 | 36.28 |
| GSMUA_Achr3P13180_001 | Banana | nucleus | 50.83 | 36.02 |
| CDY68119 | Canola | nucleus | 34.17 | 35.86 |
| CDX73419 | Canola | nucleus | 33.89 | 35.47 |
| CDX83296 | Canola | nucleus | 42.78 | 35.32 |
| CDY31576 | Canola | nucleus | 38.89 | 30.97 |
| CDY09223 | Canola | nucleus | 36.67 | 30.63 |
| CDX80199 | Canola | nucleus | 38.61 | 30.62 |
| CDY71682 | Canola | nucleus | 14.17 | 24.64 |
| CDY22537 | Canola | nucleus | 23.06 | 19.39 |
| CDY35402 | Canola | nucleus | 21.67 | 18.98 |
| CDY23833 | Canola | nucleus | 21.94 | 18.59 |
| CDX79921 | Canola | nucleus | 21.67 | 18.1 |
| CDY19560 | Canola | nucleus | 3.33 | 11.65 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078EJV0 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY01432 | ProteinID:CDY01432 | ProteinID:CDY01432.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00112432001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF18 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EDE761 | SEG:seg | : | : |
Description
BnaA07g12050D
Coordinates
chrLK031926:+:1037492..1039930
Molecular Weight (calculated)
40694.5 Da
IEP (calculated)
9.053
GRAVY (calculated)
-0.811
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MWNLNDSPDH HEESDGRWKR AGDVPISMRS STTCLLSVPP VTRNFFPSQI MEQEVPGISG SGITRNQCLV RSDPSGSGRP ENLELEITPP VKKSRRGPRS
101: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAVKF RGVDADINFN IEDYVEDLKQ MSSLTKEEFM HVIRRQSTGF PRGSSKYRGV
201: TLHKCGRWEA RLGQFLNKKY VYLGLFDTEM EAARAYDKAA IKSNGKDAVT NFDPKVYEEQ HNSPEKQWDD HNLDLSLGES NSEEFGTKSE TASMRNGFRD
301: EERLLGSHLS LAMTTTATVG SEKPLDGGGK RVGMAASSGF SPRFPPWNHH TPRTFHFFRP
101: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAVKF RGVDADINFN IEDYVEDLKQ MSSLTKEEFM HVIRRQSTGF PRGSSKYRGV
201: TLHKCGRWEA RLGQFLNKKY VYLGLFDTEM EAARAYDKAA IKSNGKDAVT NFDPKVYEEQ HNSPEKQWDD HNLDLSLGES NSEEFGTKSE TASMRNGFRD
301: EERLLGSHLS LAMTTTATVG SEKPLDGGGK RVGMAASSGF SPRFPPWNHH TPRTFHFFRP
001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
Arabidopsis Description
TOE3AP2-like ethylene-responsive transcription factor TOE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.