Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01432 | Canola | nucleus | 98.34 | 98.61 |
| Bra012139.1-P | Field mustard | nucleus | 98.06 | 98.33 |
| AT5G67180.1 | Thale cress | nucleus | 77.29 | 79.26 |
| GSMUA_Achr4P06100_001 | Banana | nucleus | 49.03 | 52.06 |
| CDX69282 | Canola | nucleus | 55.12 | 49.75 |
| CDY29538 | Canola | nucleus | 57.34 | 47.92 |
| CDY62228 | Canola | nucleus | 57.06 | 47.8 |
| CDY71179 | Canola | nucleus | 29.36 | 46.7 |
| CDY71282 | Canola | nucleus | 29.92 | 46.35 |
| GSMUA_Achr1P26080_001 | Banana | nucleus | 47.92 | 46.13 |
| GSMUA_Achr9P22540_001 | Banana | nucleus | 45.43 | 45.18 |
| GSMUA_Achr4P12860_001 | Banana | nucleus | 49.03 | 44.58 |
| GSMUA_Achr3P28340_001 | Banana | nucleus | 49.86 | 40.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.48 | 39.77 |
| CDY15760 | Canola | nucleus | 49.58 | 39.43 |
| CDY04573 | Canola | nucleus | 49.58 | 39.43 |
| GSMUA_Achr1P09830_001 | Banana | nucleus | 48.75 | 38.51 |
| CDX95767 | Canola | nucleus | 42.66 | 36.93 |
| CDY07510 | Canola | nucleus | 32.96 | 36.28 |
| GSMUA_Achr3P13180_001 | Banana | nucleus | 50.97 | 36.22 |
| CDY68119 | Canola | nucleus | 34.07 | 35.86 |
| CDX83296 | Canola | nucleus | 42.94 | 35.55 |
| CDX73419 | Canola | nucleus | 33.8 | 35.47 |
| CDY31576 | Canola | nucleus | 39.34 | 31.42 |
| CDY09223 | Canola | nucleus | 37.12 | 31.09 |
| CDX80199 | Canola | nucleus | 39.06 | 31.06 |
| CDY71682 | Canola | nucleus | 14.13 | 24.64 |
| CDY22537 | Canola | nucleus | 22.99 | 19.39 |
| CDY35402 | Canola | nucleus | 21.61 | 18.98 |
| CDY23833 | Canola | nucleus | 21.88 | 18.59 |
| CDX79921 | Canola | nucleus | 21.61 | 18.1 |
| CDY19560 | Canola | nucleus | 3.88 | 13.59 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | GO:A0A078FIK1 | UniProt:A0A078FIK1 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY12814 | ProteinID:CDY12814 | ProteinID:CDY12814.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00070444001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF18 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EC747E | SEG:seg | : | : |
Description
BnaC07g16190DBnaC07g16190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIK1]
Coordinates
chrLK032027:-:322520..324965
Molecular Weight (calculated)
40837.7 Da
IEP (calculated)
9.412
GRAVY (calculated)
-0.831
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MWNLNDSPDH HEESDGRWKR AGDVPISMRS STTCLLSVPP VTRNFFPNQI MEQEVPGISG SGITRNQSLV RSDPSGSGRP ENLELEITQP VKKSRRGPRS
101: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAVKF RGVDADINFN IEDYVEDLKQ MSSLTKEEFM HVIRRQSTGF PRGSSKYRGV
201: TLHKCGRWEA RLGQFLNKKY VYLGLFDTEM EAARAYDKAA IKSNGKDAVT NFDPKVYEEQ HNSPEKQWND HNLDLSLGES NSEEFGTKSE TASMRNGFRD
301: EERLLGSHLS LAMTTTATVG SEKQLDGGGK RVGMAAASSG FSPRFPPWNH HTPRTFHFFR P
101: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAVKF RGVDADINFN IEDYVEDLKQ MSSLTKEEFM HVIRRQSTGF PRGSSKYRGV
201: TLHKCGRWEA RLGQFLNKKY VYLGLFDTEM EAARAYDKAA IKSNGKDAVT NFDPKVYEEQ HNSPEKQWND HNLDLSLGES NSEEFGTKSE TASMRNGFRD
301: EERLLGSHLS LAMTTTATVG SEKQLDGGGK RVGMAAASSG FSPRFPPWNH HTPRTFHFFR P
001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
Arabidopsis Description
TOE3AP2-like ethylene-responsive transcription factor TOE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.