Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P02730_001 | Banana | nucleus | 88.48 | 88.48 |
| Zm00001d024468_P003 | Maize | nucleus | 72.73 | 41.38 |
| HORVU7Hr1G070230.12 | Barley | nucleus | 68.48 | 38.05 |
| KXG24541 | Sorghum | nucleus | 72.73 | 37.85 |
| GSMUA_Achr7P16540_001 | Banana | mitochondrion | 58.79 | 35.27 |
| TraesCS7D01G292500.1 | Wheat | plastid | 69.09 | 32.48 |
| TraesCS7B01G186900.1 | Wheat | nucleus | 69.09 | 32.29 |
| TraesCS7A01G292900.1 | Wheat | plastid | 69.09 | 29.46 |
| GSMUA_Achr6P30870_001 | Banana | nucleus | 48.48 | 27.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.82 | 19.66 |
| GSMUA_Achr8P01980_001 | Banana | nucleus | 42.42 | 18.92 |
| GSMUA_Achr4P06100_001 | Banana | nucleus | 37.58 | 18.24 |
| GSMUA_Achr1P26080_001 | Banana | nucleus | 40.61 | 17.87 |
| GSMUA_Achr8P18550_001 | Banana | endoplasmic reticulum, nucleus | 38.79 | 17.68 |
| GSMUA_Achr9P22540_001 | Banana | nucleus | 35.76 | 16.25 |
| GSMUA_Achr10P... | Banana | nucleus | 41.21 | 15.38 |
| GSMUA_Achr4P12860_001 | Banana | nucleus | 36.97 | 15.37 |
| GSMUA_Achr11P... | Banana | nucleus | 40.0 | 15.28 |
| GSMUA_Achr9P03060_001 | Banana | nucleus | 40.0 | 15.24 |
| GSMUA_Achr6P33140_001 | Banana | nucleus | 42.42 | 14.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.79 | 14.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.3 | 14.53 |
| GSMUA_Achr5P29290_001 | Banana | nucleus | 37.58 | 14.42 |
| GSMUA_Achr3P28340_001 | Banana | nucleus | 37.58 | 14.09 |
| GSMUA_Achr5P07270_001 | Banana | nucleus | 41.21 | 13.96 |
| GSMUA_Achr9P04270_001 | Banana | nucleus | 39.39 | 13.8 |
| GSMUA_Achr1P09830_001 | Banana | nucleus | 38.18 | 13.79 |
| GSMUA_Achr8P21030_001 | Banana | nucleus | 41.82 | 13.74 |
| GSMUA_Achr6P34420_001 | Banana | nucleus | 38.18 | 13.24 |
| GSMUA_Achr3P13180_001 | Banana | nucleus | 38.79 | 12.6 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr10G29860_001 | EnsemblPlants:GSMUA_Achr10P29860_001 | EnsemblPlants:GSMUA_Achr10T29860_001 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RML0 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PFscan:PS51032 | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF47 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00029523E0 | SEG:seg | : | : | : |
Description
AP2-like ethylene-responsive transcription factor PLT2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G29860_001]
Coordinates
chr10:-:32198106..32199694
Molecular Weight (calculated)
18435.8 Da
IEP (calculated)
5.093
GRAVY (calculated)
-0.356
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIAIGCCCV CASVYLGSYV SEEMAARAHD LAALKYWGPG PTTKLNFPVS DYEKELETMK TMSQEEFVAY VRRKSSCFSR GASIYRGVTR RRKDGKWQAR
101: IGRVGDLKDA KDIYLGTFDT EEEAAEAYDI AAIELRGVHA VTNFDLSNYD EGGIKRSEDP CTLEM
101: IGRVGDLKDA KDIYLGTFDT EEEAAEAYDI AAIELRGVHA VTNFDLSNYD EGGIKRSEDP CTLEM
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.