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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G292500.1 Wheat plastid 95.62 80.91
TraesCS7B01G186900.1 Wheat nucleus 95.96 80.74
TraesCS7A01G292900.1 Wheat plastid 95.29 73.13
Zm00001d024468_P003 Maize nucleus 70.37 72.07
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 38.05 68.48
KXG24541 Sorghum nucleus 72.39 67.82
GSMUA_Achr6P02730_001 Banana nucleus 37.37 67.27
HORVU2Hr1G063070.1 Barley nucleus 19.19 58.16
HORVU2Hr1G061450.1 Barley nucleus 19.19 53.27
HORVU6Hr1G075640.13 Barley nucleus 44.44 35.29
HORVU5Hr1G112440.1 Barley nucleus 27.95 18.86
HORVU1Hr1G056500.15 Barley nucleus, plastid 26.94 17.78
HORVU1Hr1G011800.4 Barley nucleus 29.63 17.12
HORVU3Hr1G004480.38 Barley nucleus, plastid 15.15 16.01
HORVU7Hr1G116220.4 Barley nucleus 25.59 12.84
Protein Annotations
MapMan:15.5.7.3Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU7Hr1G070230EnsemblPlants:HORVU7Hr1G070230.12
InterPro:IPR001471InterPro:IPR036955UniProt:M0YQ27PFAM:PF00847PRINTS:PR00367PFscan:PS51032
SMART:SM00380SUPFAM:SSF54171UniParc:UPI000295E8DASEG:seg::
Description
No Description!
Coordinates
chrchr7H:-:380265955..380269466
Molecular Weight (calculated)
32668.3 Da
IEP (calculated)
7.253
GRAVY (calculated)
-0.611
Length
297 amino acids
Sequence
(BLAST)
001: MATTVQPHSP DPTAITSPPP PPPPPRQEDL TAAGEGVEIA ALDEQPAHVA VAVADKGKTA PGGGKLVAEA MRKCAAPRSS RYHGVTRLKW SGKYEAHLWD
101: NTSQVEGRKR KGKHVYLGSY VTEENAARAH DLAALKYWGI SQPTKLNFNI SDYVKEIEIM KSMNQDEFVA YIRRQSSCFS RGTSSYRGVT RRKDDKWQAR
201: IGRIGESRDT KDIYLGTFET EVEAAEAYDL AAIQLRGVHA VTNFDVSNYS EEGLKKLEGS SVVVNLEDQS EVTKLAVTNF DISKHCEDGL KKLDGAS
Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.