Factsheet for HORVU1Hr1G056500.15

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G254300.1	Wheat	nucleus	91.11	97.16
TraesCS1A01G242800.1	Wheat	nucleus	89.56	96.41
TraesCS1D01G242800.1	Wheat	nucleus	90.0	95.97
EES19464	Sorghum	nucleus	75.56	81.73
Os05t0389000-02	Rice	nucleus	75.33	79.76
Zm00001d038087_P003	Maize	mitochondrion	65.78	61.28
GSMUA_AchrUn_...	Banana	nucleus	45.33	59.3
HORVU2Hr1G061450.1	Barley	nucleus	11.78	49.53
HORVU2Hr1G063070.1	Barley	nucleus	10.67	48.98
VIT_08s0007g08580.t01	Wine grape	nucleus	45.78	48.36
Solyc02g030210.2.1	Tomato	nucleus	37.33	47.86
Bra004641.1-P	Field mustard	nucleus	44.0	47.83
CDY35402	Canola	nucleus	43.33	47.45
KRG95240	Soybean	nucleus	43.78	47.13
CDY22537	Canola	nucleus	44.44	46.73
KRH66909	Soybean	nucleus	43.78	46.57
CDY23833	Canola	nucleus	43.56	46.12
CDX79921	Canola	nucleus	43.33	45.24
Bra000237.1-P	Field mustard	nucleus	45.11	43.84
AT2G41710.4	Thale cress	nucleus	44.44	43.57
KRH72011	Soybean	nucleus	41.78	42.06
HORVU7Hr1G070230.12	Barley	nucleus	17.78	26.94
HORVU6Hr1G075640.13	Barley	nucleus	19.33	23.26
PGSC0003DMT400074397	Potato	nucleus	8.67	20.31
HORVU5Hr1G112440.1	Barley	nucleus	19.56	20.0
HORVU3Hr1G004480.38	Barley	nucleus, plastid	12.44	19.93
PGSC0003DMT400036707	Potato	nucleus	9.56	18.7
HORVU1Hr1G011800.4	Barley	nucleus	20.44	17.9
HORVU7Hr1G116220.4	Barley	nucleus	19.11	14.53

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A287FQP1	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU1Hr1G056500	EnsemblPlants:HORVU1Hr1G056500.15	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF32	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B47D17D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:414509485..414516492

Molecular Weight (calculated)

49096.7 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.623

Length

450 amino acids

Sequence
(BLAST)

001: GHHCDSSKGR SARPRPPASS RRLDRSGGGA MASPNPAAAD AGLQNKLEAA AGGSEGPPPA YGAAVGVAAA EQAPPRRLAP ARKERVCTAK DRISRMTPCA
101: AGKRSSIYRG VTRHRWTGRY EAHLWDKSTW NQNQNKKGKQ VYLGAYDDEE AAARAYDLAA LKYWGAGTQI NFPVSDYTRD LEEMQMISKE DYLVSLRRKS
201: SAFSRGLPKY RGLPRQLHNS RWDASLGQLL GNDYMNLSCG KGIALDGKFA GSFGLERKID LTNYIRWWVP KKARQSDTSK AEEVADEIRA IEGSVQLTEP
301: YKLPSLGLGS HSKPSSAGLS ACGILSQSGA FKSFLEKSTK LSEECTFSKE IDEGKVAVSE PTTGHHTSAV DINMNGLLVQ RAPYTLAPVM PTMKSTWSPS
401: DPSADHLFWS NFILPSSQPV TMATITTTTF AKNEVSSSDP FKNQEYEHTK

Best Arabidopsis Sequence Match ( AT2G41710.1 )
(BLAST)

001: MASVSSSDQG PKTEAGCSGG GGGESSETVA ASDQMLLYRG FKKAKKERGC TAKERISKMP PCTAGKRSSI YRGVTRHRWT GRYEAHLWDK STWNQNQNKK
101: GKQVYLGAYD DEEAAARAYD LAALKYWGPG TLINFPVTDY TRDLEEMQNL SREEYLASLR RKSSGFSRGI AKYRGLQSRW DASASRMPGP EYFSNIHYGA
201: GDDRGTEGDF LGSFCLERKI DLTGYIKWWG ANKNRQPESS SKASEDANVE DAGTELKTLE HTSHATEPYK APNLGVLCGT QRKEKEISSP SSSSALSILS
301: QSPAFKSLEE KVLKIQESCN NENDENANRN IINMEKNNGK AIEKPVVSHG VALGGAAALS LQKSMYPLTS LLTAPLLTNY NTLDPLADPI LWTPFLPSGS
401: SLTSEVTKTE TSCSTYSYLP QEK

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G41710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.