Factsheet for HORVU2Hr1G063070.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G061450.1	Barley	nucleus	75.51	69.16
KXG24410	Sorghum	mitochondrion	54.08	64.63
CDY71682	Canola	nucleus	84.69	40.1
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	65.31	34.22
VIT_04s0023g00970.t01	Wine grape	nucleus	34.69	29.06
HORVU7Hr1G070230.12	Barley	nucleus	58.16	19.19
HORVU6Hr1G075640.13	Barley	nucleus	61.22	16.04
HORVU5Hr1G112440.1	Barley	nucleus	47.96	10.68
HORVU1Hr1G056500.15	Barley	nucleus, plastid	48.98	10.67
HORVU3Hr1G004480.38	Barley	nucleus, plastid	29.59	10.32
HORVU1Hr1G011800.4	Barley	nucleus	48.98	9.34
PGSC0003DMT400023709	Potato	nucleus	19.39	8.88
Solyc03g123430.2.1	Tomato	nucleus	42.86	8.19
HORVU7Hr1G116220.4	Barley	nucleus	42.86	7.09
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	4.08	2.19
PGSC0003DMT400055211	Potato	nucleus	4.08	1.11
PGSC0003DMT400035808	Potato	nucleus, plastid	1.02	0.65
PGSC0003DMT400023711	Potato	nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A287I6Q2	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU2Hr1G063070	EnsemblPlants:HORVU2Hr1G063070.1	InterPro:IPR001471	InterPro:IPR036955	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF48	SUPFAM:SSF54171	UniParc:UPI000B482C19	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:425284382..425284945

Molecular Weight (calculated)

11263.3 Da

IEP (calculated)

10.079

GRAVY (calculated)

-0.866

Length

98 amino acids

Sequence
(BLAST)

1: ICVGGYDKED KAARAYDLAA LKYWGTTTTT NIPISTYEKE IEEMKHMTRQ EYIAYLRRNS SGFSRGASKY RGVTRHHQQG RWQARIGRVA GNKDLYLG

Best Arabidopsis Sequence Match ( AT5G17430.1 )
(BLAST)

001: MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE
101: NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT
201: IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR
301: RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP
401: VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS
501: YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT

Arabidopsis Description

BBMBABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.