Factsheet for Os05t0389000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G254300.1	Wheat	nucleus	80.0	80.57
EES19464	Sorghum	nucleus	78.82	80.53
TraesCS1A01G242800.1	Wheat	nucleus	79.06	80.38
TraesCS1D01G242800.1	Wheat	nucleus	79.53	80.09
HORVU1Hr1G056500.15	Barley	nucleus, plastid	79.76	75.33
GSMUA_AchrUn_...	Banana	nucleus	47.29	58.43
Zm00001d038087_P003	Maize	mitochondrion	65.18	57.35
VIT_08s0007g08580.t01	Wine grape	nucleus	49.65	49.53
Bra004641.1-P	Field mustard	nucleus	48.24	49.52
KRH66909	Soybean	nucleus	48.47	48.7
KRG95240	Soybean	nucleus	47.76	48.56
Solyc02g030210.2.1	Tomato	nucleus	40.0	48.43
CDY35402	Canola	nucleus	46.82	48.42
CDY22537	Canola	nucleus	48.24	47.9
CDY23833	Canola	nucleus	47.53	47.53
CDX79921	Canola	nucleus	47.53	46.87
AT2G41710.4	Thale cress	nucleus	48.71	45.1
Bra000237.1-P	Field mustard	nucleus	48.47	44.49
KRH72011	Soybean	nucleus	44.24	42.06
Os02t0747600-01	Rice	nucleus	21.65	27.22
Os07t0235800-01	Rice	nucleus	21.41	20.87
PGSC0003DMT400074397	Potato	nucleus	9.41	20.83
Os03t0818800-01	Rice	nucleus	20.94	20.51
PGSC0003DMT400036707	Potato	nucleus	11.06	20.43
Os04t0649100-03	Rice	nucleus	21.88	20.22
Os05t0121600-01	Rice	nucleus	22.82	18.95
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	8.0	18.58
Os06t0639200-01	Rice	nucleus	14.35	18.26
Os08t0171100-01	Rice	cytosol, nucleus	2.12	15.25

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4338669	EMBL:AB897877	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os05g0389000	EnsemblPlants:Os05t0389000-02	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF32	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00043B12C3	UniProt:X5HYT8	RefSeq:XP_015638088.1	SEG:seg	:	:

Description

ETHYLENE RESPONSE FACTOR 142Similar to AP2-1 protein (Fragment). (Os05t0389000-01);AP2/ERF transcription factor, Regulation of cell elongation and proliferation in root meristem, Organ size control (Os05t0389000-02)

Coordinates

chr5:+:18812181..18817694

Molecular Weight (calculated)

46720.1 Da

IEP (calculated)

9.155

GRAVY (calculated)

-0.603

Length

425 amino acids

Sequence
(BLAST)

001: MASPGPAAGM QQKLEAAAAA AGGGDGAEWG RGMQKMEAVG AGGEGVGAGA EQVAPPPRRP VAARKERVCT AKERISRMPP CAAGKRSSIY RGVTRHRWTG
101: RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL AALKYWGAGT QINFPVSDYA RDLEEMQMIS KEDYLVSLRR KSSAFSRGLP KYRGLPRQLH
201: NSRWDASLGH LLGNDYMSLG KDITLDGKFA GTFGLERKID LTNYIRWWLP KKTRQSDTSK MEEVTDEIRA IESSMQRTEP YKFPSLGLHS NSKPSSVVLS
301: ACDILSQSDA FKSFSEKSTK LSEECTFSKE MDEGKTVTPV PATGHDTTAV NMNVNGLLVQ RAPYTLPSVT AQMKNTWNPA DPSADPLFWT NFILPASQPV
401: TMATIATTTF AKNEVSSSDP FHGQE

Best Arabidopsis Sequence Match ( AT2G41710.1 )
(BLAST)

001: MASVSSSDQG PKTEAGCSGG GGGESSETVA ASDQMLLYRG FKKAKKERGC TAKERISKMP PCTAGKRSSI YRGVTRHRWT GRYEAHLWDK STWNQNQNKK
101: GKQVYLGAYD DEEAAARAYD LAALKYWGPG TLINFPVTDY TRDLEEMQNL SREEYLASLR RKSSGFSRGI AKYRGLQSRW DASASRMPGP EYFSNIHYGA
201: GDDRGTEGDF LGSFCLERKI DLTGYIKWWG ANKNRQPESS SKASEDANVE DAGTELKTLE HTSHATEPYK APNLGVLCGT QRKEKEISSP SSSSALSILS
301: QSPAFKSLEE KVLKIQESCN NENDENANRN IINMEKNNGK AIEKPVVSHG VALGGAAALS LQKSMYPLTS LLTAPLLTNY NTLDPLADPI LWTPFLPSGS
401: SLTSEVTKTE TSCSTYSYLP QEK

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G41710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.