Factsheet for Os03t0818800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87748	Sorghum	nucleus	36.41	80.61
TraesCS5A01G473800.1	Wheat	nucleus	74.88	72.71
HORVU5Hr1G112440.1	Barley	nucleus	73.5	72.5
EER93202	Sorghum	nucleus	72.12	72.45
TraesCS5D01G486600.2	Wheat	nucleus	75.12	72.44
Zm00001d034629_P001	Maize	nucleus	71.89	72.06
TraesCS5B01G486900.1	Wheat	nucleus	42.4	70.5
Os07t0235800-01	Rice	nucleus	67.97	67.66
Os04t0649100-03	Rice	nucleus	45.39	42.83
Os05t0121600-01	Rice	nucleus	50.46	42.77
Os06t0639200-01	Rice	nucleus	28.57	37.13
Os08t0171100-01	Rice	cytosol, nucleus	4.38	32.2
Os02t0747600-01	Rice	nucleus	20.97	26.92
Os05t0389000-02	Rice	nucleus	20.51	20.94
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	7.14	16.94

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4334582	ProteinID:AAO65862.1	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EMBL:AY685113	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os03g0818800	EnsemblPlants:Os03t0818800-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF67	UniProt:Q84TB5
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00000560DB	RefSeq:XP_015628369.1	SEG:seg	:

Description

INDETERMINATE SPIKELET 1AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os03t0818800-01);Similar to APETALA2-like protein. (Os03t0818800-02)

Coordinates

chr3:+:34358193..34362334

Molecular Weight (calculated)

47279.3 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.576

Length

434 amino acids

Sequence
(BLAST)

001: MLLDLNVESP ERSGTSSSSV LNSGDAGGGG GGGGGGGLFR FDLLASSPDD DECSGEQHQL PAASGIVTRQ LLPPPPPAAP SPAPAWQPPR RAAEDAALAQ
101: RPVVAKKTRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGLEAD INFNLSDYED DLKQMRNWTK EEFVHILRRQ
201: STGFARGSSK FRGVTLHKCG RWEARMGQLL GKKYIYLGLF DTEVEAARAY DRAAIRFNGR EAVTNFEPAS YNVDALPDAG NEAIVDGDLD LDLRISQPNA
301: RDSKSDVATT GLQLTCDSPE SSNITVHQPM GSSPQWTVHH QSTPLPPQHQ RLYPSHCLGF LPNLQERPMD RRPELGPMPF PTQAWQMQAP SHLPLLHAAA
401: SSGFSAGAGA GVAAATRRQP PFPADHPFYF PPTA

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.