CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24963	Soybean	nucleus	93.3	84.79
KRH22956	Soybean	nucleus	72.77	68.49
KRH10362	Soybean	nucleus	72.54	67.01
GSMUA_AchrUn_...	Banana	nucleus	49.33	62.96
GSMUA_Achr8P01980_001	Banana	nucleus	45.76	55.41
GSMUA_Achr10P...	Banana	nucleus	54.46	55.2
KRH67634	Soybean	nucleus	54.46	53.16
Solyc10g084340.1.1	Tomato	nucleus	53.79	52.16
PGSC0003DMT400028706	Potato	nucleus	51.56	51.91
PGSC0003DMT400071732	Potato	nucleus	52.9	51.86
GSMUA_Achr9P03060_001	Banana	nucleus	49.78	51.5
Solyc09g007260.2.1	Tomato	nucleus	51.56	50.77
GSMUA_Achr6P33140_001	Banana	nucleus	53.79	50.52
KRG95917	Soybean	mitochondrion	54.91	49.8
GSMUA_Achr5P29290_001	Banana	nucleus	47.54	49.53
GSMUA_Achr11P...	Banana	nucleus	47.1	48.84
GSMUA_Achr8P21030_001	Banana	nucleus	53.12	47.41
GSMUA_Achr5P07270_001	Banana	nucleus	51.12	47.02
GSMUA_Achr6P34420_001	Banana	nucleus	47.99	45.17
GSMUA_Achr9P04270_001	Banana	nucleus	43.53	41.4
KRH77030	Soybean	nucleus	46.21	41.24
KRH70384	Soybean	nucleus	37.28	40.14
KRH57898	Soybean	nucleus	46.21	38.84
KRH04560	Soybean	nucleus	45.98	38.72
KRH28441	Soybean	nucleus	42.86	38.71
KRH33335	Soybean	nucleus	35.49	38.5
KRG95240	Soybean	nucleus	21.65	23.21
KRH66909	Soybean	nucleus	20.98	22.22
KRH72011	Soybean	nucleus	21.43	21.48

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0R0ED06	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_U022100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRG89074	ProteinID:KRG89074	ProteinID:KRG89074.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF46	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0006ED4D43	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_21:-:3547429..3551786

Molecular Weight (calculated)

49129.5 Da

IEP (calculated)

6.191

GRAVY (calculated)

-0.675

Length

448 amino acids

Sequence
(BLAST)

001: MLDLNLNAEW TDSFSNGESP LPLEKFPDGL RNQMAESGTS NSSVVNADGS SNGGGDEDSD STRAADDVYT TFNFDILKVE GANGFVTKEL FPVMSEGAKG
101: HATSSFSGTN GFVDLSFDGD GGNTSEMKML QPQNQNQTQT RTQTQQPAKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY
201: DRAAIKFRGV DADINFNLSD YEDDLKQMQN LSKEEFVHIL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYIYL GLFDSEVEAA RAYDKAAIKC
301: NGREAVTNFE PSTYEGELKS AAINEGGSQN LDLNLGIATP GPPKENWGQL QFPSFPYNTH GGRSSMERAE RIGVDPSNGL PNWAWQTHGQ VNATPVPTFS
401: AAASSGFSIS ATFPSAAIFP TSSMNSIPQS LCFTSSSMPT RNASEYYY

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.