CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95917	Soybean	mitochondrion	92.37	85.83
GSMUA_AchrUn_...	Banana	nucleus	43.36	56.7
KRG89074	Soybean	nucleus	53.16	54.46
VIT_08s0040g03180.t01	Wine grape	nucleus	57.3	53.13
GSMUA_Achr10P...	Banana	nucleus	50.33	52.26
KRH24963	Soybean	nucleus	55.77	51.93
GSMUA_Achr8P01980_001	Banana	nucleus	41.83	51.89
KRH22956	Soybean	nucleus	53.59	51.68
GSMUA_Achr11P...	Banana	nucleus	47.28	50.23
KRH10362	Soybean	nucleus	52.72	49.9
GSMUA_Achr5P29290_001	Banana	nucleus	46.19	49.3
GSMUA_Achr6P33140_001	Banana	nucleus	49.67	47.8
GSMUA_Achr9P03060_001	Banana	nucleus	44.88	47.58
Solyc06g075510.2.1	Tomato	nucleus	48.58	47.05
GSMUA_Achr8P21030_001	Banana	nucleus	50.98	46.61
PGSC0003DMT400016881	Potato	nucleus	25.05	44.92
GSMUA_Achr6P34420_001	Banana	nucleus	46.41	44.75
GSMUA_Achr5P07270_001	Banana	nucleus	45.32	42.71
GSMUA_Achr9P04270_001	Banana	nucleus	41.83	40.76
KRH77030	Soybean	nucleus	43.79	40.04
KRH70384	Soybean	nucleus	33.99	37.5
KRH28441	Soybean	nucleus	40.09	37.1
KRH04560	Soybean	nucleus	42.92	37.03
KRH57898	Soybean	nucleus	42.27	36.4
KRH33335	Soybean	nucleus	32.68	36.32
KRG95240	Soybean	nucleus	20.91	22.97
KRH66909	Soybean	nucleus	20.7	22.46
KRH72011	Soybean	nucleus	20.91	21.48

Protein Annotations

EntrezGene:100808212	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02002069	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_03G177500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1JPI9	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH67634
ProteinID:KRH67634	ProteinID:KRH67634.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF28	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002336F84	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:39015322..39018594

Molecular Weight (calculated)

50274.2 Da

IEP (calculated)

6.740

GRAVY (calculated)

-0.524

Length

459 amino acids

Sequence
(BLAST)

001: MLDLNLNADS ASDAQMESSG SFNSSVVNAA DTDDSCSYGD AVAYNFAILN TTTTATSDGP PLAAAGESSV RTIQLFPAVE SGASPAWLDF SSKVDQNGAP
101: QEQRIPPRQP PVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF NVSDYDEDIK QMSNFTKEEF
201: VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE LEAARAYDKA AIKCNGREAV TNFEPSFYEG EVISQSDNED NKQSLDLNLG
301: LAPPSYSDGQ IKNTPSNGSG MITPHSWDNI PLDKRVMFEH SASRSLTVQP SHHGFSVASG QHPSVWNGSN FFPIYEETAI EKRMEAAPVP NWAWQVKGPY
401: GGATLTPPLS TAASSGFPST ILPSAADTQI RFPNMTFLHS HFPPSITNSG TISPFFCGS

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.