CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57898	Soybean	nucleus	92.67	92.5
KRH77030	Soybean	nucleus	75.19	79.68
KRH28441	Soybean	nucleus	73.5	78.83
VIT_07s0031g00220.t01	Wine grape	nucleus	67.11	70.41
PGSC0003DMT400010231	Potato	nucleus	58.65	60.82
Solyc02g093150.2.1	Tomato	nucleus	50.38	60.09
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	39.1	57.46
KRG89074	Soybean	nucleus	38.72	45.98
KRH24963	Soybean	nucleus	39.85	43.0
KRH67634	Soybean	nucleus	37.03	42.92
KRH22956	Soybean	nucleus	37.97	42.44
KRH10362	Soybean	nucleus	37.59	41.24
KRG95917	Soybean	mitochondrion	37.22	40.08
KRH70384	Soybean	nucleus	28.57	36.54
KRH33335	Soybean	nucleus	27.63	35.59
KRG95240	Soybean	nucleus	17.67	22.49
KRH66909	Soybean	nucleus	17.29	21.75
KRH72011	Soybean	nucleus	17.11	20.36

Protein Annotations

EntrezGene:100792442	MapMan:15.5.7.3	Gene3D:3.30.730.10	EMBL:ACUP02010444	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_17G170300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1MVV0	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH04560
ProteinID:KRH04560	ProteinID:KRH04560.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00023D560A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:15975184..15979979

Molecular Weight (calculated)

58865.7 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.868

Length

532 amino acids

Sequence
(BLAST)

001: MWDLNDSPDQ RINKDEGSEE GCSSLKTSID GDDMINNNKG KRVGSVSNSS SSAVVIEDGS EEEVDEEEEE EEDDEEGGVG RSMKKRSSKI FGFSVTQDEE
101: SMDSDHPPVT RQFFPVEDAD VAVATGGGTG GSSTFPRAHW VGVKFCQSET LGAGKSSVEV SQPMKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ
201: VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFNIEDYEDD LKQMSNLTKE EFVHVLRRQS TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD
301: TEIEAARAYD KAAIKCNGKE AVTNFDPSIY NNELNTAEST GNAPDHNLDL SLGNATSKPG NNQALGNHAT NAVTHDQHLP SESNWRNGGN KPKLVNILPK
401: PCNRSNNKDS HGRDVHGESE TLRMLSQTHL HSPASNEMQL RYGPYKSHGG ESQMLQNFAH IHPPNFHFPS SSIGGRIGSD LSLSMTDQQQ WQTGPSHYLA
501: TAAASSSFQQ QIRPSSQGWL QKNGFHILMR PS

Best Arabidopsis Sequence Match ( AT5G67180.1 )
(BLAST)

001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP

Arabidopsis Description

TOE3AP2-like ethylene-responsive transcription factor TOE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.