Factsheet for Os10t0165000-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
mitochondrion 1
golgi 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039969_P001	Maize	plasma membrane	72.03	72.21
EES02542	Sorghum	golgi	72.52	72.17
Os01t0133700-00	Rice	cytosol	34.41	62.9
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	56.68	54.78
Os01t0875800-01	Rice	golgi	39.85	41.93
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	38.37	38.08
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	37.87	37.14
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	36.88	36.61
Os02t0327500-01	Rice	golgi	38.12	35.08
Os03t0731050-00	Rice	plastid	36.63	34.58
Os06t0661900-01	Rice	golgi	32.67	34.55
Os02t0175500-01	Rice	golgi	31.68	32.82
Os06t0700500-01	Rice	golgi	30.2	32.8
Os08t0225400-01	Rice	cytosol, golgi	31.68	30.99
Os01t0695200-01	Rice	plastid	26.49	29.48
Os05t0170000-02	Rice	golgi	27.72	28.07

Protein Annotations

MapMan:35.1	EntrezGene:4348166	ProteinID:AAK92614.1	ProteinID:AAP52275.1	ProteinID:BAF26130.1	ProteinID:BAT10031.1
ProteinID:EAZ15409.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	EnsemblPlantsGene:Os10g0165000	EnsemblPlants:Os10t0165000-01	PFAM:PF02485
PANTHER:PTHR31042	PANTHER:PTHR31042:SF26	UniProt:Q7XGI7	SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI000009D7EB
RefSeq:XP_015613860.1	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF266, plant family protein. (Os10t0165000-01)

Coordinates

chr10:+:4478088..4479888

Molecular Weight (calculated)

44859.8 Da

IEP (calculated)

9.879

GRAVY (calculated)

-0.243

Length

404 amino acids

Sequence
(BLAST)

001: MKEKDTSKQL LPTRASSSSR FGGKVGSNIA VVLLLVSLGF VLGLTSSNAM FLKSFYPSSL MPSSMAPLRL VLSSTSTSPS PPSPPPPPPP PPPQQPAPMH
101: SMGDEELFWR ASMAPKSRRR LPDGVVPKKV AFMFLVRGEL PLRPLWEKFF EGQRTDHYSI YVHAHPSYSF TGSPESVFHG RYVPSKAAKW GDASLVEAER
201: RLVANALLDA GNSRFVLLSE ACIPVYDFAT VHAYLTGANT SFVDSFENGG SRSRYREFFA GRNITLARWR KGAQWFEMDR ALALEVAADD ELCFPAFRDF
301: CVGRRECLID EHYLATLVTM LGWGRRNANR TLTYADWSRP VNRHPHTYTA EEVTEKVIGG IRADKRCSYN GASSGGICNL FARKFPPETL QPLLRLAPKV
401: MGFG

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.