Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- golgi 4
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G134300.1 | Wheat | golgi | 83.21 | 85.13 |
| TraesCS1D01G115700.1 | Wheat | golgi | 82.96 | 85.09 |
| TraesCS1A01G114000.1 | Wheat | golgi | 82.96 | 84.87 |
| EES19116 | Sorghum | golgi | 80.7 | 84.51 |
| HORVU0Hr1G039960.6 | Barley | golgi | 53.38 | 81.92 |
| VIT_14s0066g00820.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 60.4 | 74.38 |
| KRH56549 | Soybean | golgi | 61.4 | 67.31 |
| KRG93228 | Soybean | golgi | 60.65 | 65.41 |
| CDY09869 | Canola | mitochondrion | 59.65 | 65.03 |
| CDX69574 | Canola | mitochondrion | 59.4 | 64.75 |
| GSMUA_Achr2P14170_001 | Banana | mitochondrion | 59.4 | 64.58 |
| Bra008752.1-P | Field mustard | mitochondrion | 59.15 | 64.48 |
| AT5G14550.1 | Thale cress | mitochondrion | 58.65 | 62.07 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 58.15 | 62.03 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 81.45 | 61.21 |
| PGSC0003DMT400001379 | Potato | mitochondrion | 57.39 | 54.65 |
| Os01t0695200-01 | Rice | plastid | 41.85 | 46.01 |
| Os01t0133700-00 | Rice | cytosol | 21.3 | 38.46 |
| Os01t0875800-01 | Rice | golgi | 32.33 | 33.59 |
| Os06t0700500-01 | Rice | golgi | 30.58 | 32.8 |
| Os06t0661900-01 | Rice | golgi | 30.58 | 31.94 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 32.33 | 31.7 |
| Os02t0175500-01 | Rice | golgi | 30.33 | 31.03 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 31.83 | 30.83 |
| Os08t0225400-01 | Rice | cytosol, golgi | 31.33 | 30.27 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 29.32 | 28.75 |
| Os03t0731050-00 | Rice | plastid | 30.58 | 28.5 |
| Os01t0133600-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 29.32 | 27.99 |
| Os10t0165000-01 | Rice | golgi | 28.07 | 27.72 |
| Os02t0327500-01 | Rice | golgi | 27.82 | 25.28 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4337935 | ProteinID:AAU44326.1 | ProteinID:ABN72585.1 | EMBL:AK100216 | EMBL:AK103412 |
| ProteinID:BAF16680.1 | ProteinID:BAS92477.1 | ProteinID:EEE62484.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | EnsemblPlantsGene:Os05g0170000 | EnsemblPlants:Os05t0170000-02 |
| PFAM:PF02485 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF6 | UniProt:Q65XS5 | TMHMM:TMhelix | UniParc:UPI00003584FF |
| RefSeq:XP_015637963.1 | SEG:seg | : | : | : | : |
Description
BRITTLE CULM 10Protein of unknown function DUF266, plant family protein. (Os05t0170000-01);Protein of unknown function DUF266, plant family protein. (Os05t0170000-02)
Coordinates
chr5:-:4195278..4200361
Molecular Weight (calculated)
45172.8 Da
IEP (calculated)
7.582
GRAVY (calculated)
-0.371
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPRRWMYG RGGGKGKPAG LLLLGVFLCL SVVLLLLLHG SSPSLEGEGR KPEAVEAAGG GGEEEEVAVA RAEVEEAPLP PGNARLAFLF IARNRLPLDL
101: VWDAFFRGDK EGRFSIFVHS RPGFVLTRAT TRSGFFYNRQ VNNSVQVDWG EASMIEAERV LLAHALKDPL NERFVFVSDS CVPLYNFNYT YDYIMSSSTS
201: FVDSFADTKA GRYNPRMDPI IPVENWRKGS QWAVLTRKHA EVVVEDEEVL PEFQKHCRRR PLPEFWRDWD RPIPAEAWKA HNCIPDEHYV QTLLAQHGLE
301: EELTRRSVTH SAWDLSSSKD RERRGWHPVT YKISDATPAL VKSIKDIDNI YYETENRKEW CTSNGKPAPC FLFARKFTRA AGLKLLDLSL IAANGASTM
101: VWDAFFRGDK EGRFSIFVHS RPGFVLTRAT TRSGFFYNRQ VNNSVQVDWG EASMIEAERV LLAHALKDPL NERFVFVSDS CVPLYNFNYT YDYIMSSSTS
201: FVDSFADTKA GRYNPRMDPI IPVENWRKGS QWAVLTRKHA EVVVEDEEVL PEFQKHCRRR PLPEFWRDWD RPIPAEAWKA HNCIPDEHYV QTLLAQHGLE
301: EELTRRSVTH SAWDLSSSKD RERRGWHPVT YKISDATPAL VKSIKDIDNI YYETENRKEW CTSNGKPAPC FLFARKFTRA AGLKLLDLSL IAANGASTM
001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLREVNFSF TIIA
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLREVNFSF TIIA
Arabidopsis Description
At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.