Factsheet for Zm00001d009810_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

mitochondrion 3
vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19116	Sorghum	golgi	68.93	96.06
TraesCS1A01G114000.1	Wheat	golgi	61.21	83.33
TraesCS1B01G134300.1	Wheat	golgi	61.02	83.08
TraesCS1D01G115700.1	Wheat	golgi	60.83	83.03
Os05t0170000-02	Rice	golgi	61.21	81.45
HORVU0Hr1G039960.6	Barley	golgi	38.98	79.62
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	44.82	73.46
KRH56549	Soybean	golgi	45.76	66.76
CDX69574	Canola	mitochondrion	45.39	65.85
CDY09869	Canola	mitochondrion	45.39	65.85
Bra008752.1-P	Field mustard	mitochondrion	45.2	65.57
KRG93228	Soybean	golgi	45.01	64.59
GSMUA_Achr2P14170_001	Banana	mitochondrion	44.44	64.31
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	43.88	62.3
AT5G14550.1	Thale cress	mitochondrion	44.07	62.07
PGSC0003DMT400001379	Potato	mitochondrion	43.31	54.89
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	31.07	42.2
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	22.79	33.15
Zm00001d014668_P001	Maize	plasma membrane	22.03	31.45
Zm00001d036482_P001	Maize	plasma membrane	22.03	31.28
Zm00001d024348_P002	Maize	mitochondrion	21.66	31.08
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	22.98	30.81
Zm00001d002382_P002	Maize	golgi, mitochondrion	22.41	30.75
Zm00001d036668_P004	Maize	plasma membrane	21.66	30.42
Zm00001d031187_P002	Maize	plastid	22.79	30.4
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	22.98	30.27
Zm00001d026261_P001	Maize	golgi, mitochondrion	21.66	30.03
Zm00001d015429_P004	Maize	golgi	21.28	29.97
Zm00001d039970_P001	Maize	plastid	20.34	29.27
Zm00001d053763_P001	Maize	golgi	21.28	29.12
Zm00001d033890_P001	Maize	golgi	22.79	28.74
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	23.16	28.6
Zm00001d039969_P001	Maize	plasma membrane	21.66	28.54
Zm00001d035039_P001	Maize	plasma membrane	22.22	28.5
Zm00001d008568_P001	Maize	golgi	20.15	27.79
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	22.03	26.77
Zm00001d046936_P002	Maize	golgi	19.96	26.7
Zm00001d053393_P002	Maize	golgi, plastid	21.47	25.39
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	21.09	25.11

Protein Annotations

EntrezGene:100276060	Gene3D:3.90.70.10	MapMan:50.3.4	UniProt:A0A1D6FM57	ProteinID:AQK92750.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	GO:GO:0016757	GO:GO:0016787	GO:GO:0019538
InterPro:Glyco_trans_14	PFAM:PF00112	PFAM:PF02485	ScanProsite:PS00139	PANTHER:PTHR31042	PANTHER:PTHR31042:SF6
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A_C	SMART:SM00645	SUPFAM:SSF54001	TMHMM:TMhelix
UniParc:UPI00084588DF	EnsemblPlantsGene:Zm00001d009810	EnsemblPlants:Zm00001d009810_P003	EnsemblPlants:Zm00001d009810_T003	SEG:seg	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr8:+:82399471..82420640

Molecular Weight (calculated)

59861.3 Da

IEP (calculated)

8.159

GRAVY (calculated)

-0.288

Length

531 amino acids

Sequence
(BLAST)

001: MKPRRFGYGY GYGYGRVRRA AALLLLLLLC LCLSSLFLLL LHGSSTPLEP AAAAAAAEAR VAEAQAEVEE APLPPGNSKV AFLFIARNRL PLELVWDAFF
101: RGDKEGRFSI LVHSRPGFVL TRATTRSRFF YNRQVNDSIQ VDWGEASMIT AERILLSHAL KDPLNDRFVF VSDSCVPLYN FSYTYDYIMS SSTSFVDRYH
201: ESISKYCGPS APFRGGGAPF GIDVPFGPPG PDMLPTFVNW STYGAVTPIQ DQGDCGSCWA FGVTGLIEAA HFIRNKELIK LSEQHLIDGN NLRNFGCKHG
301: SCSEALDYIM RNGGIINAES YPYKEAQEPV RSITVHSNSL LFADTKAGRY NPRMDPVIPV ENWRKGSQWA VLIKKHAEVV VDDEVVLPEF QKHCRRRPLP
401: EFWRDWDRPI PAEAWKAHNC IPDEHYVQTL LAQSGLEEEL TRRSVTHSAW DLSASKDRER RGWHPVTYKV SDATTRLIKS IKDIDNIYYE TENRREWCTS
501: NGKPAPCFLF ARKFTRGAGL KLLDSSLIAS K

Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)

001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK

Arabidopsis Description

At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.