Factsheet for Zm00001d042652_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, vacuole

Predictor Summary:

plastid 1
golgi 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, vacuole
Any Predictor:	golgi, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03971	Sorghum	golgi	80.93	88.1
Os01t0875800-01	Rice	golgi	61.16	68.49
TraesCS3B01G418600.1	Wheat	golgi	59.77	66.75
TraesCS3A01G386500.1	Wheat	golgi	60.7	66.75
TraesCS3D01G379500.1	Wheat	golgi	60.0	66.15
HORVU3Hr1G081930.2	Barley	golgi	60.0	65.98
Zm00001d035039_P001	Maize	plasma membrane	49.77	51.69
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	47.67	46.91
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	38.37	45.21
Zm00001d039969_P001	Maize	plasma membrane	40.7	43.42
Zm00001d008568_P001	Maize	golgi	38.84	43.38
Zm00001d031187_P002	Maize	plastid	40.0	43.22
Zm00001d039970_P001	Maize	plastid	36.98	43.09
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	40.0	42.68
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	38.6	41.92
Zm00001d033890_P001	Maize	golgi	39.53	40.38
Zm00001d024348_P002	Maize	mitochondrion	31.86	37.03
Zm00001d036482_P001	Maize	plasma membrane	32.09	36.9
Zm00001d014668_P001	Maize	plasma membrane	31.63	36.56
Zm00001d002382_P002	Maize	golgi, mitochondrion	31.16	34.63
Zm00001d026261_P001	Maize	golgi, mitochondrion	30.0	33.68
Zm00001d036668_P004	Maize	plasma membrane	29.53	33.6
Zm00001d053763_P001	Maize	golgi	30.23	33.51
Zm00001d015429_P004	Maize	golgi	28.84	32.89
Zm00001d053393_P002	Maize	golgi, plastid	33.49	32.07
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	33.02	31.84
Zm00001d046936_P002	Maize	golgi	28.84	31.23
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	27.44	30.18
Zm00001d009810_P003	Maize	mitochondrion, vacuole	28.6	23.16

Protein Annotations

EntrezGene:100276489	MapMan:35.1	UniProt:B4FSP8	EMBL:BT040136	EMBL:BT066401	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_14	ProteinID:ONM35970.1	PFAM:PF02485	PANTHER:PTHR31042	PANTHER:PTHR31042:SF21
TMHMM:TMhelix	UniParc:UPI00017B78D3	EnsemblPlantsGene:Zm00001d042652	EnsemblPlants:Zm00001d042652_P001	EnsemblPlants:Zm00001d042652_T001	SEG:seg

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr3:+:175437859..175439701

Molecular Weight (calculated)

48198.5 Da

IEP (calculated)

8.809

GRAVY (calculated)

-0.223

Length

430 amino acids

Sequence
(BLAST)

001: MSPPRPSCMQ LQPCLPFSNC NSSSYNYGQT YALVAFVHDK GMKGALDDFK VMLTRNEPIT GLAKVVAVLV IFALGVVAGL WVSAGVRRSQ QESVDPRSTG
101: FHGGGGGGIC CRPEPNPDFE EFVAPTRLMH DMTDRELFWR ATLVPTAAAR YPFERVPKVA FMFLAGRGVL PLAPLWERFF RGAGHEERFS VYVHAPPGVA
201: INVSADSPFY GRQIPSQKTS WGSVTLVDAE RRLLANALLD FSNERFVLLS ESCIPVHNFT TVYDYLVGSR HSFVEAYYRD DRGCRSRYSR RMAPDITLRE
301: WRKGSQWLEL SRDLAASVLA DTRYYPLFRR HCTPSCYPDE HYVQTYVSLR HGARNSNRTV TRVEWPAGTS HPVTYGAGDA TPELVRSIRT SAEPCAYNSR
401: LTSTCYLFAR KFSPDALAPL LNMSAAVMHY

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.