CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	88.1	80.93
Os01t0875800-01	Rice	golgi	67.09	69.01
TraesCS3B01G418600.1	Wheat	golgi	64.56	66.23
TraesCS3A01G386500.1	Wheat	golgi	64.56	65.22
HORVU3Hr1G081930.2	Barley	golgi	64.56	65.22
TraesCS3D01G379500.1	Wheat	golgi	64.3	65.13
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	54.68	52.43
EES11719	Sorghum	golgi, mitochondrion, peroxisome	51.39	45.52
EER93518	Sorghum	golgi, plasma membrane, plastid	44.3	45.34
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	45.32	44.53
EER93516	Sorghum	golgi	42.78	44.47
EES02542	Sorghum	golgi	43.8	42.61
EES02543	Sorghum	golgi	42.78	42.57
KXG31955	Sorghum	golgi	43.29	40.71
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	41.27	40.05
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	26.58	39.62
KXG20769	Sorghum	golgi	35.44	37.63
KXG24737	Sorghum	golgi	35.44	36.55
KXG20537	Sorghum	mitochondrion	33.16	34.66
EES12818	Sorghum	golgi	33.92	34.63
EES04616	Sorghum	golgi	33.16	33.94
EES19116	Sorghum	golgi	30.89	32.02
OQU84731	Sorghum	plastid	37.47	30.83
KXG33181	Sorghum	golgi, mitochondrion, plastid	29.37	29.67

Protein Annotations

EnsemblPlants:EES03971	EnsemblPlantsGene:SORBI_3003G374300	EntrezGene:8063120	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF21	PFAM:PF02485	ProteinID:EES03971	ProteinID:EES03971.1	RefSeq:XP_002458851.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0001A8535D	UniProt:C5XRC5	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:68942816..68944959

Molecular Weight (calculated)

44305.8 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.232

Length

395 amino acids

Sequence
(BLAST)

001: MKGGLDDFKV MLTRNEPITG LAKVVAFLVI FTLGVVAGLW VSAGAGVRLS QESIVPRSIG FQGGGGGGGG GGGGGICCRP DLDPEFEEFV APTRLMHDMT
101: DEELFWRATL VPAAARYPFE RVPKVAFMFL AGHGVLPLAP LWERFFRGGH EDRFSIYVHA PPGVAINVSE DSPFYGRQIP SQKTEWGSVT LVDAEKRLLA
201: NALLDFSNER FVLLSESCIP VHNFTTVYDY LVGSRHSFVE SYYRNDRGVR NRYSRSMLPD ITLRQWRKGS QWLELSRDLA TSVLTDTRYY PLFRRHCRPS
301: CYPDEHYVQT YVTLRHGARN SNRTVTRVEW QPGESHPVTY GARDATPELV RSIRTSAEPC AYNSRPTSTC YLFARKFAPD ALAPLLNMSS TVMHY

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.