CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3
golgi 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053393_P002	Maize	golgi, plastid	76.67	81.96
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	75.42	81.17
TraesCS1D01G394500.1	Wheat	mitochondrion	47.29	77.74
HORVU1Hr1G085260.1	Barley	cytosol	37.29	74.58
Os02t0327500-01	Rice	golgi	60.42	66.06
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	58.96	60.99
VIT_17s0000g03400.t01	Wine grape	cytosol	37.5	60.81
VIT_17s0000g03410.t01	Wine grape	cytosol	37.29	60.68
GSMUA_Achr6P09800_001	Banana	cytosol	35.0	60.43
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	58.75	60.39
PGSC0003DMT400037735	Potato	cytosol	24.79	57.77
PGSC0003DMT400014396	Potato	cytosol	34.17	55.41
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	52.08	53.19
KRH41690	Soybean	golgi	37.71	48.66
CDX73016	Canola	mitochondrion	34.58	47.84
KRH60391	Soybean	golgi, plastid	37.29	47.61
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	40.0	47.41
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	34.38	47.14
PGSC0003DMT400037733	Potato	golgi	37.29	46.49
Solyc05g009120.2.1	Tomato	nucleus	37.71	46.41
KRH35920	Soybean	golgi, plasma membrane	38.96	45.06
PGSC0003DMT400013770	Potato	golgi	38.12	44.42
Solyc12g036400.1.1	Tomato	extracellular	38.12	44.42
KRG90861	Soybean	golgi, plasma membrane	38.75	44.18
Solyc05g009110.1.1	Tomato	golgi	35.42	44.16
EER93518	Sorghum	golgi, plasma membrane, plastid	35.42	44.04
EER93516	Sorghum	golgi	34.38	43.42
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	35.83	42.79
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	37.08	42.58
KRH38159	Soybean	golgi	38.54	42.33
EES02543	Sorghum	golgi	34.79	42.07
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	36.67	41.31
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	34.38	40.54
KRH48513	Soybean	golgi	37.71	40.49
KRH39163	Soybean	golgi	37.92	40.35
EES02542	Sorghum	golgi	33.96	40.15
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	33.33	38.84
KXG31955	Sorghum	golgi	33.33	38.1
EES03971	Sorghum	golgi	30.83	37.47
EES11719	Sorghum	golgi, mitochondrion, peroxisome	34.58	37.22
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	19.17	34.72
KXG20769	Sorghum	golgi	26.88	34.68
KXG24737	Sorghum	golgi	27.29	34.2
EES12818	Sorghum	golgi	27.08	33.59
KXG20537	Sorghum	mitochondrion	25.83	32.8
EES04616	Sorghum	golgi	26.25	32.64
EES19116	Sorghum	golgi	22.92	28.87
KXG33181	Sorghum	golgi, mitochondrion, plastid	23.12	28.39
CDX73017	Canola	cytosol	0.42	14.29

Protein Annotations

EnsemblPlants:OQU84731	EnsemblPlantsGene:SORBI_3004G114500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7	PFAM:PF02485
ProteinID:OQU84731	ProteinID:OQU84731.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B424498	UniProt:A0A1Z5RMD9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:11570112..11576668

Molecular Weight (calculated)

52567.8 Da

IEP (calculated)

10.590

GRAVY (calculated)

-0.303

Length

480 amino acids

Sequence
(BLAST)

001: MTTTKNLKQH QQQQQHVLPM AAPLRTKLLL CAALGFTLGV VATAFLMTSS SSAASAALRG RGGALAGLFL PPSPATRNAV QQDRRPPPAA ARSQPKQAGA
101: VVPPAMIRRS RTSDAPPLPA AGMPPPPVPP APAGITSATA PPPPPPGIRG ENGQAPPRLT TTTTASGGNG SGSIFGDDDD DDEELMARAA AAPREVPAGT
201: VPRVAFLFLT RWDLPMAPLW EKFFEGHRGL YNVYVHSDPA FNGSEPPETS AFYRRRIPSK EVKWGEVSMV EAERRLLAHA LLDDHSNARF VLLSESHVPL
301: FDLPTVHSYL VNSTKVYLES YDQPGATGRG RYSRRMSPVV SPWQWRKGSQ WFDLDRPLAA DVVADRVYFP LFRRFCRRSC YADEHYLPTL LNIIRRTSSS
401: AAGANRSLTW VDWSHGGPHP ARFTRMEVTV DFLRWLRGGA GSTCTYNGRT TTLCFLFARK FLPNSLTRFL RFAPKVMGFG

Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)

001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI

Arabidopsis Description

Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.