CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031187_P002	Maize	plastid	82.31	84.17
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	81.08	83.33
HORVU5Hr1G077980.1	Barley	cytosol, plastid	30.47	67.76
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	67.57	67.57
TraesCS3B01G478200.1	Wheat	mitochondrion	58.23	67.14
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	66.09	64.82
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	65.6	63.57
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	63.64	63.17
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	58.48	62.96
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	63.64	61.96
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	65.85	60.91
EER93518	Sorghum	golgi, plasma membrane, plastid	53.07	55.96
GSMUA_Achr1P04580_001	Banana	cytosol	38.57	53.04
EER93516	Sorghum	golgi	49.14	52.63
GSMUA_Achr1P04590_001	Banana	cytosol	38.57	51.82
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	50.37	50.99
EES02543	Sorghum	golgi	41.28	42.32
EES02542	Sorghum	golgi	41.28	41.38
EES03971	Sorghum	golgi	40.05	41.27
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	40.05	39.56
KXG31955	Sorghum	golgi	40.79	39.52
EES11719	Sorghum	golgi, mitochondrion, peroxisome	41.77	38.12
KXG20769	Sorghum	golgi	33.66	36.83
KXG24737	Sorghum	golgi	34.64	36.81
KXG20537	Sorghum	mitochondrion	33.91	36.51
EES04616	Sorghum	golgi	34.4	36.27
EES12818	Sorghum	golgi	34.15	35.92
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	23.34	35.85
OQU84731	Sorghum	plastid	40.54	34.38
EES19116	Sorghum	golgi	29.98	32.02
KXG33181	Sorghum	golgi, mitochondrion, plastid	28.5	29.67

Protein Annotations

EnsemblPlants:KXG24124	EnsemblPlantsGene:SORBI_3008G188100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28
PFAM:PF02485	ProteinID:KXG24124	ProteinID:KXG24124.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00081ADAE6
UniProt:A0A1B6PEL6	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:62244509..62247910

Molecular Weight (calculated)

44612.7 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.091

Length

407 amino acids

Sequence
(BLAST)

001: MLIGMPQGAA ATAVDSNGKD GGGGANPTST ARPAAALPLK LLRPLLLLAV LGTGFLAVVV LFLGGPTYSA MLPRLSLAPD AVLPAPASAG KAPLDRWKRA
101: PASAWHNMTD EELLWAASWR PSVRRYPYRR TPKVAFMFLT RGPLPLAPLW DRFFAGAGDA ALFSVYVHAT PGYRHDFPPA SAFHRRFVPS QVAEWGKASM
201: LDAERRLLAN ALLDPANELF VLLSESCIPL YGFPAVYSYL TRSRASFVGA FDDPGPAGRG RYRAGLAPEV RREQFRKGAQ WFELDRELAV DVVADERYYP
301: KFREHCRPPC YVDEHYLPTA LSIEAPARIA NRSVTWVDWS RGGAHPATFA GKDVDEAFLK RLTAAPAKQN CTYNGQPSEV CFLFARKFAP STLRPLLRLA
401: PKLLGYG

Best Arabidopsis Sequence Match ( AT5G25970.3 )
(BLAST)

001: MQCSRVLQLE EGKEIVVTSS RTGLTKAFPY KLLLLLGFFL AFTVVLFFIS VSTIKYYGIN SVVTSVTSSF VPCHEKINDL DKWIKPLVVL MHNMSDEELL
101: WGASFMPRRK EYPFNRVPKI AFMFLTMGPL PLAPLWERLL KGHEKLYSVY IHSPVSSSAK FPASSVFYRR HIPSQVAEWG RMTMCDAERR LLANALLDIS
201: NEWFVLLSES CIPLFNFTTI YTYMTKSEHS FMGSFDDPGA YGRGRYHGNM APEVFIDQWR KGSQWFEINR ELAVSIVKDT LYYPKFKEFC QPACYVDEHY
301: FPTMLTIEKP AALANRSVTW VDWSRGGAHP ATFGAQDINE EFFARILKGD NCTYNGGYTS MCYLFARKFS PSALEPLVQI APKLLSS

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1PDT4]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.