Factsheet for TraesCS3B01G478200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G077980.1	Barley	cytosol, plastid	45.04	86.89
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	92.63	78.8
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	92.63	77.86
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	87.25	75.12
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	92.35	74.09
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	78.19	73.02
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	84.99	71.77
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	67.99	58.97
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	65.72	58.59
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	67.14	58.23
Zm00001d031187_P002	Maize	plastid	64.87	57.54
GSMUA_Achr1P04580_001	Banana	cytosol	41.08	48.99
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	53.54	48.21
GSMUA_Achr1P04590_001	Banana	cytosol	41.08	47.85
TraesCS3B01G418600.1	Wheat	golgi	46.46	42.6
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	44.76	39.01
TraesCS2B01G616400.1	Wheat	golgi	45.33	38.28
TraesCS3B01G046900.1	Wheat	golgi	41.93	37.47
TraesCS1B01G026200.1	Wheat	golgi	40.23	36.04
TraesCS7B01G320800.1	Wheat	golgi	36.54	34.86
TraesCS3B01G047000.1	Wheat	plastid	39.66	34.57
TraesCS7B01G392700.1	Wheat	golgi	36.26	33.86
TraesCS6B01G181900.1	Wheat	golgi	37.39	33.85
TraesCS2B01G452200.4	Wheat	mitochondrion	36.26	33.68
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	43.06	32.76
TraesCS1B01G134300.1	Wheat	golgi	30.31	27.44
TraesCS3B01G291600.1	Wheat	plastid	30.88	26.33

Protein Annotations

EnsemblPlants:TraesCS3B01G478200.1	EnsemblPlantsGene:TraesCS3B01G478200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28	PFAM:PF02485
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:726605307..726606866

Molecular Weight (calculated)

40094.1 Da

IEP (calculated)

10.129

GRAVY (calculated)

-0.339

Length

353 amino acids

Sequence
(BLAST)

001: MFFGGASSYY RLPRLAVPDA LLPAPPKQGE EDRHGGAAGR WWGRPPARSA WHNMSDEELL WAASFEPRAQ RRPHRRATPK VAFLFLTRGP LPLAPLWERF
101: FNSTGRELFS VYVHTTPGYR LDFPPSSPFH HRQVPSKPTR WGYVNVVDAE RRLLANALLD LTNERFVLVS KSCIPLYPLP VVHAYLTRSR HSFVGAFDDP
201: SPHGRGRYRA GLAPDVTLSQ WRKGAQWFEM DRRLAVFVIA DDRYYPRFRT KCRAPCYVDE HYLPTVLSIE APERIANRSI TLVDWSRGGA HPATFGAADV
301: TEDFLGMLVG KKGNAERCMY NGQPVEVCFL FARKFAPAAM PQLLHLSSKI LGY

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.