Factsheet for TraesCS5B01G008600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, peroxisome

Predictor Summary:

plastid 1
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, peroxisome
Any Predictor:	endoplasmic reticulum, golgi, peroxisome
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G478200.1	Wheat	mitochondrion	78.8	92.63
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	92.29	91.19
HORVU5Hr1G077980.1	Barley	cytosol, plastid	39.28	89.07
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	91.57	86.36
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	84.82	85.85
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	77.83	85.45
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	83.37	82.78
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	65.06	66.34
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	64.82	66.09
Zm00001d031187_P002	Maize	plastid	63.13	65.83
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	62.17	65.15
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	48.67	51.53
GSMUA_Achr1P04580_001	Banana	cytosol	35.9	50.34
GSMUA_Achr1P04590_001	Banana	cytosol	35.66	48.84
TraesCS3B01G418600.1	Wheat	golgi	41.2	44.42
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	40.24	41.23
TraesCS2B01G616400.1	Wheat	golgi	40.96	40.67
TraesCS3B01G046900.1	Wheat	golgi	38.07	40.0
TraesCS1B01G026200.1	Wheat	golgi	36.39	38.32
TraesCS3B01G047000.1	Wheat	plastid	36.14	37.04
TraesCS7B01G320800.1	Wheat	golgi	32.53	36.49
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	39.76	35.56
TraesCS7B01G392700.1	Wheat	golgi	32.05	35.19
TraesCS6B01G181900.1	Wheat	golgi	33.01	35.13
TraesCS2B01G452200.4	Wheat	mitochondrion	31.57	34.47
TraesCS1B01G134300.1	Wheat	golgi	26.75	28.46
TraesCS3B01G291600.1	Wheat	plastid	27.47	27.54

Protein Annotations

EnsemblPlants:TraesCS5B01G008600.1	EnsemblPlantsGene:TraesCS5B01G008600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:-:9222419..9224206

Molecular Weight (calculated)

45598.8 Da

IEP (calculated)

10.240

GRAVY (calculated)

-0.168

Length

415 amino acids

Sequence
(BLAST)

001: MPGGGGGAAA VVVVGEGKDG HAAPARAAPR SFPPKLLRPA LLSAVLATAF LAAALLIFFG GASSYYRLPR LAVPDALLPA PPACDHQKQG GAPGRWWARP
101: PARSAWHNMS DEELLWAASF EPRAQPHRRG RTPRKVAFLF LTRGPLPLAP LWERFFNGTG TGGAKGGREL FSVYVHTTPG YRLDVPPSSP FHRRQVPSKP
201: TRWGNVNVVD AERRLLANAL LDLSNERFVL VSESCIPLYP LPVVHAYLTR SRHSFVGAFD DPSPHGRGRY RVGLAPDVTL SQWRKGAQWF EMDRRLAVFV
301: IADERYYPRF RTECRAPCYV DEHYLPTVLS IEAPERIANR SITLVDWSRG GAHPATFGAA DVTEDFLGTL VGKKGNAERC MYNGQPVEVC FLFARKFAPA
401: ALPQLLSLSS KILGY

Best Arabidopsis Sequence Match ( AT3G21310.1 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.