Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 98.56 | 99.04 |
| TraesCSU01G137600.1 | Wheat | cytosol, golgi, plasma membrane | 99.04 | 96.96 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 92.82 | 93.05 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 71.29 | 72.33 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 70.81 | 67.73 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 65.07 | 67.16 |
| EES11719 | Sorghum | golgi, mitochondrion, peroxisome | 71.29 | 66.82 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 50.96 | 56.2 |
| CDY31036 | Canola | golgi | 50.24 | 55.7 |
| CDX93443 | Canola | golgi | 50.48 | 54.95 |
| CDX94911 | Canola | golgi | 50.48 | 54.81 |
| CDY20644 | Canola | golgi | 50.72 | 54.36 |
| PGSC0003DMT400063986 | Potato | golgi | 51.2 | 53.9 |
| TraesCS3B01G418600.1 | Wheat | golgi | 49.52 | 53.77 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 50.96 | 53.52 |
| Solyc01g103150.2.1 | Tomato | golgi | 50.48 | 53.15 |
| KRH26270 | Soybean | golgi | 48.56 | 53.0 |
| Bra018450.1-P | Field mustard | golgi | 50.48 | 52.23 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 49.04 | 52.03 |
| AT1G10280.1 | Thale cress | golgi | 50.72 | 51.46 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 50.96 | 51.45 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 44.02 | 46.94 |
| TraesCS3B01G478200.1 | Wheat | mitochondrion | 38.28 | 45.33 |
| TraesCS5B01G008600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 40.67 | 40.96 |
| TraesCS3B01G047000.1 | Wheat | plastid | 39.0 | 40.25 |
| TraesCS3B01G046900.1 | Wheat | golgi | 36.12 | 38.23 |
| TraesCS7B01G320800.1 | Wheat | golgi | 33.25 | 37.57 |
| TraesCS1B01G026200.1 | Wheat | golgi | 35.17 | 37.31 |
| TraesCS7B01G392700.1 | Wheat | golgi | 33.25 | 36.77 |
| TraesCS2B01G452200.4 | Wheat | mitochondrion | 32.78 | 36.05 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 39.71 | 35.78 |
| TraesCS6B01G181900.1 | Wheat | golgi | 32.06 | 34.36 |
| TraesCS1B01G134300.1 | Wheat | golgi | 27.99 | 30.0 |
| TraesCS3B01G291600.1 | Wheat | plastid | 29.43 | 29.71 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G616400.1 | EnsemblPlantsGene:TraesCS2B01G616400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF25 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:793646018..793647274
Molecular Weight (calculated)
47254.3 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.176
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLKPRRVG AGDEEAAAGV VVPLAPRKDY CCWSWSSWCL LRALTLLLVL LTGVLIGFGA SANISRYYYY TLLTGTSTSS SSPPSLISSN SPTPPSTLAM
101: SSEQHISQPF MSFVHPGSPE GHSMTDAELF WRASMVPRVE EYPYQRVPKV AFLFLTRGPL PFARLWERFF RGHEGLYSVY VHALPEYVLN VSATSPFYGR
201: QIPSRDVSWG SITLVDAEKR LLANALLDHS NQRFVLVSES CVPVFNFPTV YEYLINSAAS YVESYNIDVP QCAGRYNPRM APDVTEQQWR KGSEWFELSR
301: ELAVDIVADR RYYHVFRKHC TPSCYPDEHY IPTYLHLVHG PRNANRTITW VDWSRGGPHP ARYGKASVTK EFIQAIRNNG TQCLYNGRPT TVCYLFARKF
401: APSALGTLIN LTTTLLDF
101: SSEQHISQPF MSFVHPGSPE GHSMTDAELF WRASMVPRVE EYPYQRVPKV AFLFLTRGPL PFARLWERFF RGHEGLYSVY VHALPEYVLN VSATSPFYGR
201: QIPSRDVSWG SITLVDAEKR LLANALLDHS NQRFVLVSES CVPVFNFPTV YEYLINSAAS YVESYNIDVP QCAGRYNPRM APDVTEQQWR KGSEWFELSR
301: ELAVDIVADR RYYHVFRKHC TPSCYPDEHY IPTYLHLVHG PRNANRTITW VDWSRGGPHP ARYGKASVTK EFIQAIRNNG TQCLYNGRPT TVCYLFARKF
401: APSALGTLIN LTTTLLDF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.