Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063986 | Potato | golgi | 97.48 | 97.48 |
| GSMUA_Achr7P23520_001 | Banana | cytosol | 50.38 | 67.8 |
| GSMUA_Achr8P29190_001 | Banana | cytosol | 44.33 | 64.47 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 61.21 | 64.12 |
| CDY31036 | Canola | golgi | 59.19 | 62.33 |
| KRH26270 | Soybean | golgi | 58.94 | 61.1 |
| CDX93443 | Canola | golgi | 58.94 | 60.94 |
| CDX94911 | Canola | golgi | 58.94 | 60.78 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 60.2 | 60.66 |
| CDY20644 | Canola | golgi | 59.19 | 60.26 |
| Bra018450.1-P | Field mustard | golgi | 59.95 | 58.91 |
| GSMUA_Achr5P01370_001 | Banana | golgi | 53.4 | 57.92 |
| AT1G10280.1 | Thale cress | golgi | 59.95 | 57.77 |
| GSMUA_Achr8P08460_001 | Banana | golgi | 52.64 | 57.58 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 59.95 | 57.49 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 56.42 | 55.31 |
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 56.17 | 55.06 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 55.92 | 54.81 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 56.17 | 54.79 |
| HORVU7Hr1G076790.5 | Barley | golgi | 55.92 | 54.28 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 55.67 | 53.64 |
| Zm00001d035039_P001 | Maize | plasma membrane | 55.67 | 53.38 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 52.9 | 52.76 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 53.65 | 51.7 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 53.15 | 50.72 |
| TraesCS2B01G616400.1 | Wheat | golgi | 53.15 | 50.48 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 52.14 | 49.64 |
| TraesCSU01G137600.1 | Wheat | cytosol, golgi, plasma membrane | 52.9 | 49.18 |
| Solyc08g065860.2.1 | Tomato | golgi | 46.85 | 48.82 |
| Solyc06g062490.2.1 | Tomato | golgi | 45.09 | 48.38 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 51.89 | 47.14 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 45.34 | 46.75 |
| EES11719 | Sorghum | golgi, mitochondrion, peroxisome | 52.14 | 46.41 |
| Solyc05g009130.2.1 | Tomato | golgi | 42.57 | 45.07 |
| Solyc05g009120.2.1 | Tomato | nucleus | 42.07 | 42.82 |
| Solyc12g036400.1.1 | Tomato | extracellular | 43.32 | 41.75 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 43.83 | 40.85 |
| Solyc05g009110.1.1 | Tomato | golgi | 39.29 | 40.52 |
| Solyc02g036250.1.1 | Tomato | cytosol | 15.11 | 38.22 |
| Solyc02g080970.2.1 | Tomato | plastid | 31.99 | 32.48 |
| Solyc07g008940.2.1 | Tomato | golgi | 31.99 | 32.32 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 29.47 | 31.28 |
Protein Annotations
| EnsemblPlants:Solyc01g103150.2.1 | EnsemblPlantsGene:Solyc01g103150.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF3 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002768219 | UniProt:K4B1P1 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:91816705..91821390
Molecular Weight (calculated)
45626.8 Da
IEP (calculated)
8.360
GRAVY (calculated)
-0.157
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNRGEKEDL EGKLPVSVTR DSSVSLLRVL ATLIVFVIGV VIGLTSSSHI DRYFTFQAEQ IIANNALADT VSKESGNCSV CEKEDCLSMD SFVRPKILIH
101: GMSDVELFWR ASLEPYKKEF PFKRVPKVAF MFLTRGELPF IPLWERFFQG QDVNKYSIYI HALPGFVLSI SNTSVFYKRQ IPSQHVEWGS VTLVDAEKRL
201: MANALLDFSN ERFVLLSESC IPVYNFPTVY KYLIGSIHSF VESYDDPSRY GRGRYNRHMR PDIKLPDWRK GSQWFEMNRT LAVRVVSDTK YYDLFERFCK
301: PACYPDEHYI PTLIRLFHGP LNANRTVTYV DWSLGGPHPA AFSAVNITEG FLQLIRNNGT ACAYNSEKTH VCYLFARKFN PSALEPLLNL SSKVMEY
101: GMSDVELFWR ASLEPYKKEF PFKRVPKVAF MFLTRGELPF IPLWERFFQG QDVNKYSIYI HALPGFVLSI SNTSVFYKRQ IPSQHVEWGS VTLVDAEKRL
201: MANALLDFSN ERFVLLSESC IPVYNFPTVY KYLIGSIHSF VESYDDPSRY GRGRYNRHMR PDIKLPDWRK GSQWFEMNRT LAVRVVSDTK YYDLFERFCK
301: PACYPDEHYI PTLIRLFHGP LNANRTVTYV DWSLGGPHPA AFSAVNITEG FLQLIRNNGT ACAYNSEKTH VCYLFARKFN PSALEPLLNL SSKVMEY
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.