Factsheet for GSMUA_Achr7P23520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P29190_001	Banana	cytosol	68.14	73.63
GSMUA_Achr5P01370_001	Banana	golgi	79.32	63.93
GSMUA_Achr8P08460_001	Banana	golgi	76.95	62.53
GSMUA_Achr6P09800_001	Banana	cytosol	54.58	57.91
VIT_12s0035g01710.t01	Wine grape	golgi	73.56	57.26
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	76.61	56.78
GSMUA_Achr8P31730_001	Banana	cytosol	52.54	56.57
CDY31036	Canola	golgi	71.53	55.97
CDX93443	Canola	golgi	71.53	54.95
CDX94911	Canola	golgi	71.53	54.81
CDY20644	Canola	golgi	71.53	54.1
KRH26270	Soybean	golgi	69.49	53.52
KRH06031	Soybean	golgi, plasma membrane, plastid	71.19	53.3
Bra018450.1-P	Field mustard	golgi	71.53	52.23
AT1G10280.1	Thale cress	golgi	71.53	51.21
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	71.86	51.21
PGSC0003DMT400063986	Potato	golgi	68.47	50.88
Solyc01g103150.2.1	Tomato	golgi	67.8	50.38
GSMUA_Achr1P04590_001	Banana	cytosol	51.19	49.84
GSMUA_Achr1P04580_001	Banana	cytosol	48.47	48.31
GSMUA_Achr1P14240_001	Banana	golgi	54.58	44.97
GSMUA_Achr3P25730_001	Banana	golgi	51.53	42.34
GSMUA_Achr10P...	Banana	cytosol	40.0	41.99
GSMUA_Achr11P...	Banana	cytosol	41.02	41.58
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	40.68	40.54
GSMUA_Achr5P24160_001	Banana	mitochondrion	43.73	36.75
GSMUA_Achr4P12520_001	Banana	golgi	44.75	33.76
GSMUA_Achr4P05750_001	Banana	golgi	44.07	33.25
GSMUA_Achr2P14170_001	Banana	mitochondrion	37.29	29.97
GSMUA_Achr9P21910_001	Banana	golgi	36.95	28.24
GSMUA_Achr3P28930_001	Banana	golgi	36.61	28.2

Protein Annotations

EnsemblPlants:GSMUA_Achr7P23520_001	EnsemblPlants:GSMUA_Achr7T23520_001	EnsemblPlantsGene:GSMUA_Achr7G23520_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF3
PFAM:PF02485	UniParc:UPI00029597EA	UniProt:M0TK38	MapMan:35.1	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G23520_001]

Coordinates

chr7:+:25690050..25692789

Molecular Weight (calculated)

34277.0 Da

IEP (calculated)

8.811

GRAVY (calculated)

-0.252

Length

295 amino acids

Sequence
(BLAST)

001: MTDDELNWRA SMVPKMDEYP FQRVPKVAFL FMTRGPLPFV PLWDRFFKGH KGLYSIYVHT LPDYKLNVSG TSAFYGRQIP SEEVSWGSIT LVDAEKRLLA
101: NALLDFSNER FVLLSESCIP VYNFPTVYEY LINSAHSFVE SYDENTRQGR GRYSWRMAPK IMLYQWRKGS EWFELNRELA TNIVAEHKYY PLFRKYCKPS
201: CYPDEHYIPT YLNMFHGALN ANRSLTWVDW SRGGSHPARY GAPNITVEFI QSIRNNGTFC LYNSVPTSIC FLFARKFAPS ALAPLLNLTS TVMGF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.