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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94911 Canola golgi 96.35 96.1
Bra019951.1-P Field mustard endoplasmic reticulum, golgi, plastid 99.22 92.03
CDY20644 Canola golgi 92.45 91.03
CDY31036 Canola golgi 89.06 90.72
AT1G10280.1 Thale cress golgi 90.62 84.47
GSMUA_Achr7P23520_001 Banana cytosol 54.95 71.53
VIT_12s0035g01710.t01 Wine grape golgi 64.84 65.7
GSMUA_Achr8P29190_001 Banana cytosol 45.83 64.47
KRH26270 Soybean golgi 63.02 63.19
KRH06031 Soybean golgi, plasma membrane, plastid 64.32 62.69
PGSC0003DMT400063986 Potato golgi 61.72 59.7
GSMUA_Achr5P01370_001 Banana golgi 56.25 59.02
Solyc01g103150.2.1 Tomato golgi 60.94 58.94
GSMUA_Achr8P08460_001 Banana golgi 54.43 57.58
GSMUA_Achr8P32350_001 Banana golgi, mitochondrion 58.33 56.28
Os08t0110400-01 Rice cytosol, golgi, peroxisome 59.11 55.77
TraesCS7D01G317600.1 Wheat cytosol, golgi, peroxisome 58.07 55.06
TraesCS7A01G320800.1 Wheat cytosol, golgi, peroxisome 57.81 54.81
TraesCS7B01G221700.1 Wheat cytosol, golgi, peroxisome 57.55 54.57
EES14395 Sorghum endoplasmic reticulum, golgi, plastid 57.81 53.88
CDX80552 Canola cytosol 21.35 53.59
HORVU7Hr1G076790.5 Barley golgi 57.03 53.55
Zm00001d035039_P001 Maize plasma membrane 57.55 53.38
Os04t0272400-01 Rice golgi, nucleus, peroxisome 54.69 50.97
TraesCS2D01G566600.1 Wheat cytosol, golgi, plasma membrane 54.95 50.72
TraesCS2B01G616400.1 Wheat golgi 54.95 50.48
HORVU2Hr1G127680.1 Barley cytosol, golgi, plasma membrane 53.65 49.4
TraesCSU01G137600.1 Wheat cytosol, golgi, plasma membrane 54.69 49.18
CDX78440 Canola cytosol 40.62 48.3
EES11719 Sorghum golgi, mitochondrion, peroxisome 54.95 47.31
CDY51451 Canola golgi 46.88 47.24
Zm00001d026711_P001 Maize cytosol, golgi, plasma membrane 53.65 47.14
CDX97139 Canola golgi 46.61 46.37
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 45.83 46.19
CDX97141 Canola golgi 46.35 46.11
CDX69735 Canola golgi 45.83 45.6
CDY43927 Canola golgi 46.09 45.5
CDX87842 Canola golgi 46.09 45.5
CDX88209 Canola golgi 40.89 44.86
CDX70417 Canola cytosol 34.9 44.67
CDX96025 Canola golgi, vacuole 47.92 44.23
CDX97140 Canola golgi 46.61 43.66
CDY19328 Canola golgi, mitochondrion 42.97 43.65
CDY44904 Canola golgi 46.35 43.41
CDX81507 Canola golgi 46.35 43.41
CDX96026 Canola golgi 44.53 43.18
CDY59035 Canola golgi 47.14 42.99
CDX73016 Canola mitochondrion 38.8 42.94
CDX78439 Canola golgi 44.79 42.89
CDY26504 Canola cytosol 16.67 42.11
CDX70676 Canola cytosol, golgi, nucleus 43.49 41.54
CDX78674 Canola cytosol, golgi, plasma membrane 43.49 41.44
CDX69465 Canola golgi 43.49 41.23
CDX89388 Canola cytosol 23.96 40.35
CDY20597 Canola golgi 35.42 40.0
CDX70416 Canola golgi 45.31 39.82
CDY70337 Canola golgi 36.98 38.07
CDY49466 Canola cytosol 25.0 37.35
CDX68738 Canola golgi 35.16 35.9
CDY28259 Canola golgi 35.16 35.9
CDX94406 Canola golgi 33.59 34.04
CDY11878 Canola golgi 34.11 33.68
CDX88613 Canola golgi 34.11 33.68
CDX92736 Canola mitochondrion 33.07 33.51
CDY46724 Canola mitochondrion 34.9 33.25
CDY42774 Canola mitochondrion 32.81 33.25
CDY30178 Canola mitochondrion 34.64 33.08
CDY38285 Canola golgi 33.33 32.9
CDY25922 Canola golgi 33.07 32.65
CDY57290 Canola cytosol 28.91 32.08
CDY66853 Canola mitochondrion 33.07 32.07
CDX82625 Canola mitochondrion 32.81 31.9
CDY03361 Canola mitochondrion 32.81 31.9
CDY51089 Canola golgi, mitochondrion 32.81 31.9
CDX69574 Canola mitochondrion 30.21 31.69
CDY34605 Canola golgi 30.99 31.48
CDY09869 Canola mitochondrion 29.95 31.42
CDY31228 Canola golgi 30.21 31.35
CDY03552 Canola golgi, mitochondrion 32.55 31.17
CDY24895 Canola mitochondrion 30.21 31.1
CDY66012 Canola mitochondrion 29.43 30.96
CDY12850 Canola mitochondrion 32.03 30.9
CDX83505 Canola mitochondrion 32.03 30.9
CDY08638 Canola mitochondrion 30.47 30.87
CDY01412 Canola mitochondrion 32.03 30.83
CDY21023 Canola golgi 29.95 30.59
CDX97918 Canola golgi 40.62 24.72
CDY66259 Canola cytosol 27.34 24.42
CDY14193 Canola mitochondrion 33.07 24.24
CDX73017 Canola cytosol 0.52 14.29
Protein Annotations
EnsemblPlants:CDX93443EnsemblPlantsGene:GSBRNA2T00156109001GO:A0A078E1K2GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF3
PFAM:PF02485ProteinID:CDX93443ProteinID:CDX93443.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE186D
MapMan:35.1:::::
Description
BnaA06g06050D
Coordinates
chrLK031876:+:217031..219221
Molecular Weight (calculated)
43572.8 Da
IEP (calculated)
7.850
GRAVY (calculated)
-0.231
Length
384 amino acids
Sequence
(BLAST)
001: MARGRAGEKE EGEKHIGLLK LAQTLSFLLI FMAGIIIGLA ASSHIDRYFN SLPTTAFSSS SSSSSAALQT VPDYSNCTGF VRPGNLSHGM SDDELFWRAS
101: MVPVKEEYPY ERAPKVAFMF LTRGPLPMLP LWEKFFRGNE KYLSVYVHTP PGYDMNVSSG SAFYDRQIPS QKVEWGSPLL TDAEKRLLGN ALLDFSNERF
201: ILLSESCVPV YNFSTVYSYL INSAYSFVDS YDEPTRYGRG RYSRKMLPDI KLHHWRKGSQ WFEVNRKLAI YIISDSKYYS LFKQFCRPAC YPDEHYIPTF
301: LNMFHGSVNA NRSVTWVDWS IGGPHPATYG ADNITEGFLQ SIRKNETDCL YNEEPTSLCF LFARKFAPSA LAPLMNLSST VMGF
Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.