Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88209 | Canola | golgi | 94.77 | 41.43 |
| CDY26504 | Canola | cytosol | 39.87 | 40.13 |
| AT5G25970.2 | Thale cress | golgi | 83.01 | 32.82 |
| CDX69735 | Canola | golgi | 75.82 | 30.05 |
| CDX97141 | Canola | golgi | 75.16 | 29.79 |
| CDX97139 | Canola | golgi | 75.16 | 29.79 |
| CDX78440 | Canola | cytosol | 58.82 | 27.86 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 65.36 | 27.86 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 68.63 | 27.2 |
| CDX97140 | Canola | golgi | 70.59 | 26.34 |
| CDX89388 | Canola | cytosol | 39.22 | 26.32 |
| CDX78439 | Canola | golgi | 68.63 | 26.18 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 65.36 | 25.58 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 60.13 | 25.21 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 64.05 | 25.0 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 64.05 | 25.0 |
| Os03t0731050-00 | Rice | plastid | 69.28 | 24.77 |
| EER93516 | Sorghum | golgi | 61.44 | 24.74 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 64.05 | 24.5 |
| CDX70416 | Canola | golgi | 69.93 | 24.49 |
| CDY43927 | Canola | golgi | 61.44 | 24.16 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 63.4 | 24.13 |
| Zm00001d033890_P001 | Maize | golgi | 66.01 | 23.99 |
| CDX87842 | Canola | golgi | 60.78 | 23.91 |
| CDY51451 | Canola | golgi | 59.48 | 23.88 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 55.56 | 23.74 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 58.82 | 23.62 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 62.09 | 23.57 |
| CDY20597 | Canola | golgi | 52.29 | 23.53 |
| CDY49466 | Canola | cytosol | 37.91 | 22.57 |
| CDY31036 | Canola | golgi | 52.94 | 21.49 |
| CDX93443 | Canola | golgi | 53.59 | 21.35 |
| CDX94911 | Canola | golgi | 53.59 | 21.3 |
| CDY19328 | Canola | golgi, mitochondrion | 51.63 | 20.9 |
| CDY20644 | Canola | golgi | 52.29 | 20.51 |
| CDX70417 | Canola | cytosol | 39.87 | 20.33 |
| CDX73016 | Canola | mitochondrion | 43.79 | 19.31 |
| CDX69465 | Canola | golgi | 50.98 | 19.26 |
| CDX78674 | Canola | cytosol, golgi, plasma membrane | 50.33 | 19.11 |
| CDX70676 | Canola | cytosol, golgi, nucleus | 49.67 | 18.91 |
| CDY70337 | Canola | golgi | 42.48 | 17.43 |
| CDX68738 | Canola | golgi | 42.48 | 17.29 |
| CDY28259 | Canola | golgi | 42.48 | 17.29 |
| CDY44904 | Canola | golgi | 45.75 | 17.07 |
| CDX81507 | Canola | golgi | 45.1 | 16.83 |
| CDX96025 | Canola | golgi, vacuole | 45.1 | 16.59 |
| CDY66012 | Canola | mitochondrion | 39.22 | 16.44 |
| CDX96026 | Canola | golgi | 42.48 | 16.41 |
| CDY59035 | Canola | golgi | 45.1 | 16.39 |
| CDX94406 | Canola | golgi | 39.87 | 16.09 |
| CDY42774 | Canola | mitochondrion | 39.22 | 15.83 |
| CDX83505 | Canola | mitochondrion | 40.52 | 15.58 |
| CDY12850 | Canola | mitochondrion | 40.52 | 15.58 |
| CDX69574 | Canola | mitochondrion | 37.25 | 15.57 |
| CDX92736 | Canola | mitochondrion | 38.56 | 15.57 |
| CDY01412 | Canola | mitochondrion | 40.52 | 15.54 |
| CDY11878 | Canola | golgi | 39.22 | 15.42 |
| CDX88613 | Canola | golgi | 39.22 | 15.42 |
| CDY09869 | Canola | mitochondrion | 36.6 | 15.3 |
| CDX82625 | Canola | mitochondrion | 39.22 | 15.19 |
| CDY03361 | Canola | mitochondrion | 38.56 | 14.94 |
| CDY51089 | Canola | golgi, mitochondrion | 38.56 | 14.94 |
| CDY25922 | Canola | golgi | 37.91 | 14.91 |
| CDY38285 | Canola | golgi | 37.91 | 14.91 |
| CDY31228 | Canola | golgi | 35.95 | 14.86 |
| CDY66853 | Canola | mitochondrion | 37.91 | 14.65 |
| CDY21023 | Canola | golgi | 35.95 | 14.63 |
| CDY57290 | Canola | cytosol | 31.37 | 13.87 |
| CDY34605 | Canola | golgi | 33.99 | 13.76 |
| CDY24895 | Canola | mitochondrion | 33.33 | 13.67 |
| CDY03552 | Canola | golgi, mitochondrion | 35.29 | 13.47 |
| CDY30178 | Canola | mitochondrion | 35.29 | 13.43 |
| CDY46724 | Canola | mitochondrion | 35.29 | 13.4 |
| CDY08638 | Canola | mitochondrion | 32.68 | 13.19 |
| CDY66259 | Canola | cytosol | 32.03 | 11.4 |
| CDX97918 | Canola | golgi | 46.41 | 11.25 |
| CDY14193 | Canola | mitochondrion | 35.29 | 10.31 |
| CDX73017 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX80552 | EnsemblPlantsGene:GSBRNA2T00133664001 | GO:A0A078CUZ2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 |
| PFAM:PF02485 | ProteinID:CDX80552 | ProteinID:CDX80552.1 | UniParc:UPI0004EDB3B7 | MapMan:35.2 | : |
Description
BnaC07g28920D
Coordinates
chrLK031821:+:1264212..1264673
Molecular Weight (calculated)
17570.0 Da
IEP (calculated)
6.765
GRAVY (calculated)
-0.287
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MILVPMADRG RYNGHMSPEV SIEQWRKGSQ WFEVNRELAV SIVKDTLYYP KFKEFCTPAC YVDEHYFPTM LTIEKPAALA NRSLTWVDWS RGGAHPATFG
101: EPDINEDFFA RIMKRDNCTY NGESTSMCSL FARKFSPSAL EPLIQIAPKI LSF
101: EPDINEDFFA RIMKRDNCTY NGESTSMCSL FARKFSPSAL EPLIQIAPKI LSF
001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNECFM GAADEEGPDG RGRYRTEMEP EITLSQWRKG SQWFEINRKL AVEIVQDTTY YPKFKEFCRP PCYVDEHYFP TMLSMKHRVL LANRTLTWTD
301: WSRGGAHPAT FGKADVTESF LKKLTGAKSC LYNDHQSQIC YLFARKFAPS ALEPLLQLAP KILELGSNIS STRHSWYLF
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNECFM GAADEEGPDG RGRYRTEMEP EITLSQWRKG SQWFEINRKL AVEIVQDTTY YPKFKEFCRP PCYVDEHYFP TMLSMKHRVL LANRTLTWTD
301: WSRGGAHPAT FGKADVTESF LKKLTGAKSC LYNDHQSQIC YLFARKFAPS ALEPLLQLAP KILELGSNIS STRHSWYLF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.