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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80552 Canola cytosol 41.43 94.77
Bra009874.1-P Field mustard golgi 99.14 89.9
AT5G25970.2 Thale cress golgi 84.0 75.97
CDX97141 Canola golgi 72.29 65.54
CDX78440 Canola cytosol 60.29 65.33
CDX97139 Canola golgi 72.0 65.28
CDX69735 Canola golgi 71.43 64.77
CDX78439 Canola golgi 69.14 60.35
CDX97140 Canola golgi 70.0 59.76
CDX70417 Canola cytosol 50.86 59.33
GSMUA_Achr3P25730_001 Banana golgi 58.0 56.55
CDX70416 Canola golgi 68.57 54.92
EER93518 Sorghum golgi, plasma membrane, plastid 58.86 53.37
GSMUA_Achr1P14240_001 Banana golgi 52.57 51.4
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 57.14 51.15
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 53.14 50.96
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 56.57 50.51
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 56.29 50.26
EER93516 Sorghum golgi 53.43 49.21
CDY43927 Canola golgi 54.57 49.1
EER93517 Sorghum golgi, mitochondrion, plasma membrane 56.29 49.01
HORVU4Hr1G010270.2 Barley golgi, peroxisome 56.0 49.0
CDY51451 Canola golgi 53.14 48.82
CDX87842 Canola golgi 54.0 48.59
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 52.57 48.29
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 54.86 47.64
Zm00001d033890_P001 Maize golgi 57.14 47.51
Os03t0731050-00 Rice plastid 54.86 44.86
CDY31036 Canola golgi 44.29 41.11
CDX94911 Canola golgi 45.14 41.04
CDX93443 Canola golgi 44.86 40.89
CDY20644 Canola golgi 44.29 39.74
CDY26504 Canola cytosol 16.86 38.82
CDX73016 Canola mitochondrion 37.14 37.46
CDY19328 Canola golgi, mitochondrion 40.29 37.3
CDY20597 Canola golgi 35.71 36.76
CDX96026 Canola golgi 40.86 36.11
CDX69465 Canola golgi 41.43 35.8
CDY44904 Canola golgi 41.71 35.61
CDX81507 Canola golgi 41.43 35.37
CDX96025 Canola golgi, vacuole 41.71 35.1
CDX78674 Canola cytosol, golgi, plasma membrane 40.0 34.74
CDY59035 Canola golgi 41.71 34.68
CDX70676 Canola cytosol, golgi, nucleus 39.71 34.58
CDX68738 Canola golgi 34.0 31.65
CDY28259 Canola golgi 34.0 31.65
CDX89388 Canola cytosol 20.57 31.58
CDY42774 Canola mitochondrion 33.43 30.87
CDY70337 Canola golgi 32.86 30.83
CDX92736 Canola mitochondrion 33.14 30.61
CDX88613 Canola golgi 34.0 30.59
CDY11878 Canola golgi 34.0 30.59
CDX94406 Canola golgi 32.86 30.34
CDX83505 Canola mitochondrion 34.0 29.9
CDY12850 Canola mitochondrion 34.0 29.9
CDY01412 Canola mitochondrion 34.0 29.82
CDY38285 Canola golgi 33.14 29.82
CDY03361 Canola mitochondrion 33.43 29.62
CDY49466 Canola cytosol 21.71 29.57
CDY25922 Canola golgi 32.86 29.56
CDY66853 Canola mitochondrion 33.14 29.29
CDX82625 Canola mitochondrion 32.86 29.11
CDY51089 Canola golgi, mitochondrion 32.0 28.35
CDY57290 Canola cytosol 28.0 28.32
CDY03552 Canola golgi, mitochondrion 31.71 27.68
CDY46724 Canola mitochondrion 31.71 27.54
CDY30178 Canola mitochondrion 31.43 27.36
CDY66012 Canola mitochondrion 27.43 26.3
CDX69574 Canola mitochondrion 27.43 26.23
CDY09869 Canola mitochondrion 27.14 25.96
CDY31228 Canola golgi 27.14 25.68
CDY21023 Canola golgi 26.57 24.73
CDY34605 Canola golgi 26.57 24.6
CDY24895 Canola mitochondrion 25.71 24.13
CDY08638 Canola mitochondrion 26.0 24.01
CDX73017 Canola cytosol 0.86 21.43
CDX97918 Canola golgi 38.57 21.39
CDY14193 Canola mitochondrion 32.0 21.37
CDY66259 Canola cytosol 22.86 18.6
Protein Annotations
EnsemblPlants:CDX88209EnsemblPlantsGene:GSBRNA2T00147675001GO:A0A078DI89GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF54
PFAM:PF02485ProteinID:CDX88209ProteinID:CDX88209.1SEG:segTMHMM:TMhelixUniParc:UPI0004EEAE8B
MapMan:35.1:::::
Description
BnaA06g28000D
Coordinates
chrLK031854:+:1382567..1384018
Molecular Weight (calculated)
39721.2 Da
IEP (calculated)
7.985
GRAVY (calculated)
0.002
Length
350 amino acids
Sequence
(BLAST)
001: MLSRAVQLEE GKEILVTCGR TGLNKAFPIK LLLLLVFFLV FTVAFIIITV STIKYYGINS VVTSVTSGFV PCGAEPNVLD KWIKPPLALM HNMSDEELLW
101: LASFMPQRKD YPFTRVPKIA FMFLTLGPLP FAPLWERLLK GHEKHYSVYI HSQVSSSAEF PASSVFYRRQ IPSQVAEWGR MTICDAERRL LANALLDISN
201: ECPYGRGRYN GNMSPEVSIE QWRKGSQWFE VNRELAVSLV KDTLYYPKFK EFCTPACYVD EHYFPTMLTI EKPAALANRS LTWVDWSRGG AHPATFGEPD
301: INEDFFAKIM KGDNCTYNGE STSMCSLFAR KFSPSALEPL IQIAPKILSF
Best Arabidopsis Sequence Match ( AT5G25970.3 )
(BLAST)
001: MQCSRVLQLE EGKEIVVTSS RTGLTKAFPY KLLLLLGFFL AFTVVLFFIS VSTIKYYGIN SVVTSVTSSF VPCHEKINDL DKWIKPLVVL MHNMSDEELL
101: WGASFMPRRK EYPFNRVPKI AFMFLTMGPL PLAPLWERLL KGHEKLYSVY IHSPVSSSAK FPASSVFYRR HIPSQVAEWG RMTMCDAERR LLANALLDIS
201: NEWFVLLSES CIPLFNFTTI YTYMTKSEHS FMGSFDDPGA YGRGRYHGNM APEVFIDQWR KGSQWFEINR ELAVSIVKDT LYYPKFKEFC QPACYVDEHY
301: FPTMLTIEKP AALANRSVTW VDWSRGGAHP ATFGAQDINE EFFARILKGD NCTYNGGYTS MCYLFARKFS PSALEPLVQI APKLLSS
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1PDT4]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.