Factsheet for TraesCS4B01G062000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

golgi 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	golgi, plasma membrane, plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	97.96	97.96
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	97.45	97.7
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	95.92	94.0
EER93518	Sorghum	golgi, plasma membrane, plastid	86.73	88.08
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	76.02	81.64
EER93516	Sorghum	golgi	77.55	80.0
Zm00001d033890_P001	Maize	golgi	85.2	79.33
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	76.53	74.44
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	76.02	74.13
PGSC0003DMT400035937	Potato	mitochondrion	52.81	70.41
Os03t0731050-00	Rice	plastid	75.0	68.69
VIT_09s0002g02660.t01	Wine grape	cytosol	51.02	68.03
GSMUA_Achr3P25730_001	Banana	golgi	61.73	67.41
GSMUA_Achr1P14240_001	Banana	golgi	59.69	65.36
CDX80552	Canola	cytosol	25.0	64.05
KRH48972	Soybean	cytosol	34.44	63.38
KRH13326	Soybean	cytosol	34.18	62.91
VIT_04s0008g00690.t01	Wine grape	golgi, nucleus, plasma membrane, plastid	61.48	62.6
CDX78440	Canola	cytosol	50.77	61.61
KRH47176	Soybean	cytosol, golgi, plasma membrane	59.95	60.72
KRH05512	Soybean	nucleus	58.93	60.63
KRH15500	Soybean	nucleus	58.67	60.53
Solyc08g065860.2.1	Tomato	golgi	58.67	60.37
KRH44223	Soybean	cytosol, golgi, plasma membrane	59.18	59.95
CDX97141	Canola	golgi	58.67	59.59
AT5G11730.1	Thale cress	golgi	58.67	59.59
CDX97139	Canola	golgi	58.67	59.59
Bra008941.1-P	Field mustard	golgi	58.67	59.59
CDX69735	Canola	golgi	58.42	59.33
Bra006114.1-P	Field mustard	golgi	53.57	58.66
AT3G21310.1	Thale cress	golgi	56.89	58.22
Bra006113.1-P	Field mustard	golgi	56.89	57.77
CDX70417	Canola	cytosol	44.13	57.67
AT5G25970.2	Thale cress	golgi	56.89	57.62
Bra031273.1-P	Field mustard	golgi	55.61	57.22
CDY51451	Canola	golgi	55.36	56.96
PGSC0003DMT400012489	Potato	golgi	54.08	56.84
CDX88209	Canola	golgi	50.26	56.29
Bra009874.1-P	Field mustard	golgi	55.36	56.22
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	55.1	56.1
Solyc06g062490.2.1	Tomato	golgi	52.81	55.95
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	54.34	55.91
CDX78439	Canola	golgi	56.89	55.61
PGSC0003DMT400006434	Potato	golgi, nucleus, plasma membrane	54.34	55.18
CDX97140	Canola	golgi	57.4	54.88
CDY43927	Canola	golgi	54.34	54.76
Bra030418.1-P	Field mustard	golgi	54.34	54.76
CDX87842	Canola	golgi	54.34	54.76
TraesCS3B01G478200.1	Wheat	mitochondrion	48.21	53.54
AT1G51770.1	Thale cress	golgi	54.59	52.71
CDX70416	Canola	golgi	56.12	50.34
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	51.53	48.67
TraesCS3B01G418600.1	Wheat	golgi	44.64	45.45
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	45.66	44.2
TraesCS2B01G616400.1	Wheat	golgi	46.94	44.02
TraesCS1B01G026200.1	Wheat	golgi	38.78	38.58
TraesCS3B01G046900.1	Wheat	golgi	38.52	38.23
TraesCS7B01G320800.1	Wheat	golgi	35.71	37.84
TraesCS6B01G181900.1	Wheat	golgi	37.24	37.44
TraesCS2B01G452200.4	Wheat	mitochondrion	35.71	36.84
TraesCS3B01G047000.1	Wheat	plastid	37.76	36.54
TraesCS7B01G392700.1	Wheat	golgi	35.2	36.51
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	41.33	34.91
TraesCS1B01G134300.1	Wheat	golgi	30.36	30.51
TraesCS3B01G291600.1	Wheat	plastid	29.59	28.02

Protein Annotations

EnsemblPlants:TraesCS4B01G062000.1	EnsemblPlantsGene:TraesCS4B01G062000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF54	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4B:+:53855581..53857871

Molecular Weight (calculated)

44721.6 Da

IEP (calculated)

8.777

GRAVY (calculated)

-0.263

Length

392 amino acids

Sequence
(BLAST)

001: MQARVASMED MKEARLGAPG QGGGRVFPTG MLKVFLGFLL LGVGLSAAGM YMARHTLAAA APAIFRPCLG ASAGAGEEQP LEGLERWTRA PSRARHAMTD
101: EELLWRASFA PRVRPYPFRR VPKVAFMFLT RGPLPLAPLW ERFFRGHEGR YSVYVHALPS YRANFTKDSV FYHRQIPSKV AEWGQMTMCD AERRLLANAL
201: LDISNEWFVL VSESCIPIFD FNTTYEYFQN SSQSFVMVFD DPGPYGRGRY NYNMTPEVEL EQWRKGSQWF EVDRDLGIEI IRDTRYYPKF KEFCRPHCYV
301: DEHYFPTMLT IEAPQSLANR SVTWVDWSRG GAHPATFGRG DITEEFLRRV QTGRTCLYNN QNSTTCFLFA RKFAPSALQP LLVLAPTVLG YG

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.