Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13326 | Soybean | cytosol | 95.77 | 95.77 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 98.12 | 54.01 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 71.36 | 51.7 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 93.9 | 51.68 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 69.95 | 38.6 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 69.48 | 38.44 |
| AT3G21310.1 | Thale cress | golgi | 67.14 | 37.34 |
| Bra031273.1-P | Field mustard | golgi | 66.67 | 37.27 |
| CDY51451 | Canola | golgi | 66.67 | 37.27 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 63.85 | 37.26 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 62.44 | 37.15 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 65.73 | 36.75 |
| KRH05512 | Soybean | nucleus | 65.73 | 36.75 |
| EER93516 | Sorghum | golgi | 65.26 | 36.58 |
| Bra030418.1-P | Field mustard | golgi | 66.67 | 36.5 |
| CDX87842 | Canola | golgi | 66.67 | 36.5 |
| CDY43927 | Canola | golgi | 66.67 | 36.5 |
| KRH15500 | Soybean | nucleus | 64.32 | 36.05 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 64.79 | 35.75 |
| KRH46947 | Soybean | cytosol | 50.23 | 35.55 |
| AT1G51770.1 | Thale cress | golgi | 67.61 | 35.47 |
| PGSC0003DMT400012489 | Potato | golgi | 61.5 | 35.12 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 63.85 | 34.78 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 63.85 | 34.69 |
| Solyc06g062490.2.1 | Tomato | golgi | 60.09 | 34.59 |
| KRH01729 | Soybean | cytosol | 48.83 | 34.55 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 63.38 | 34.44 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 63.38 | 33.75 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 63.38 | 33.58 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 55.87 | 33.15 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 62.44 | 33.0 |
| Os03t0731050-00 | Rice | plastid | 65.73 | 32.71 |
| Zm00001d033890_P001 | Maize | golgi | 63.85 | 32.3 |
| KRH41690 | Soybean | golgi | 48.83 | 27.96 |
| KRH60391 | Soybean | golgi, plastid | 48.36 | 27.39 |
| KRH26270 | Soybean | golgi | 48.83 | 27.15 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 49.77 | 26.9 |
| KRH35920 | Soybean | golgi, plasma membrane | 48.36 | 24.82 |
| KRG90861 | Soybean | golgi, plasma membrane | 48.83 | 24.7 |
| KRH48513 | Soybean | golgi | 49.77 | 23.71 |
| KRH56549 | Soybean | golgi | 40.38 | 23.63 |
| KRH11480 | Soybean | mitochondrion | 41.31 | 23.34 |
| KRH38159 | Soybean | golgi | 47.89 | 23.34 |
| KRH39163 | Soybean | golgi | 49.3 | 23.28 |
| KRH16109 | Soybean | mitochondrion | 42.72 | 23.1 |
| KRH05009 | Soybean | golgi, mitochondrion | 42.25 | 22.84 |
| KRG93228 | Soybean | golgi | 38.97 | 22.43 |
| KRH19073 | Soybean | golgi | 41.31 | 22.39 |
| KRH36494 | Soybean | mitochondrion | 42.72 | 21.62 |
| KRH02808 | Soybean | golgi | 41.78 | 21.19 |
Protein Annotations
| EMBL:ACUP02004320 | EnsemblPlants:KRH48972 | EnsemblPlantsGene:GLYMA_07G123800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 |
| PFAM:PF02485 | ProteinID:KRH48972 | ProteinID:KRH48972.1 | UniParc:UPI0006ED717C | UniProt:A0A0R0J2Q0 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr7:+:14654259..14654900
Molecular Weight (calculated)
24786.8 Da
IEP (calculated)
8.111
GRAVY (calculated)
-0.368
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMCDTERRL LANALLDISN EWFILLSESC IPLQNFSIVY LYIARSRYSF MGAIDEPGPY RRGRYDGNMA PEINMSDWRK GSQWFEINRE LALRIVEDNT
101: YYPKLKEFCK PHKCYVDEHY FQTMLTINTP HLLANRSLTY VDWSRGGAHP TTFGKDDIKE EFFKKILQDQ TCLYNNQPSS LCFLFARKFA PNALGPLLDI
201: APKALGIGKR HSF
101: YYPKLKEFCK PHKCYVDEHY FQTMLTINTP HLLANRSLTY VDWSRGGAHP TTFGKDDIKE EFFKKILQDQ TCLYNNQPSS LCFLFARKFA PNALGPLLDI
201: APKALGIGKR HSF
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.