Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- mitochondrion 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51451 | Canola | golgi | 81.98 | 82.41 |
| Bra031273.1-P | Field mustard | golgi | 81.98 | 82.41 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 81.2 | 81.63 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 55.09 | 71.77 |
| AT1G51770.1 | Thale cress | golgi | 74.41 | 70.2 |
| KRH48972 | Soybean | cytosol | 37.34 | 67.14 |
| KRH13326 | Soybean | cytosol | 37.08 | 66.67 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 63.97 | 63.31 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 63.45 | 62.79 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 62.66 | 62.34 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 61.88 | 61.4 |
| Solyc06g062490.2.1 | Tomato | golgi | 57.96 | 60.0 |
| PGSC0003DMT400012489 | Potato | golgi | 58.22 | 59.79 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 60.05 | 59.59 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 56.66 | 59.45 |
| AT5G11730.1 | Thale cress | golgi | 59.53 | 59.07 |
| EER93516 | Sorghum | golgi | 57.7 | 58.16 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 58.49 | 57.14 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 58.22 | 57.03 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 58.22 | 56.89 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 53.26 | 56.82 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 52.48 | 56.15 |
| AT5G25970.2 | Thale cress | golgi | 56.4 | 55.81 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 57.96 | 55.5 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 58.22 | 55.47 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 57.44 | 54.59 |
| Zm00001d033890_P001 | Maize | golgi | 59.53 | 54.16 |
| Os03t0731050-00 | Rice | plastid | 55.61 | 49.77 |
| AT1G10280.1 | Thale cress | golgi | 48.04 | 44.66 |
| AT1G68390.1 | Thale cress | plastid | 46.21 | 43.38 |
| AT1G10880.1 | Thale cress | golgi | 43.6 | 43.26 |
| AT1G68380.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 43.34 | 42.35 |
| AT5G16170.1 | Thale cress | golgi | 42.82 | 39.9 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 42.56 | 39.0 |
| AT4G31350.4 | Thale cress | golgi | 35.51 | 36.17 |
| AT2G19160.1 | Thale cress | golgi, mitochondrion | 36.29 | 35.28 |
| AT4G25870.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 35.51 | 34.96 |
| AT5G57270.5 | Thale cress | golgi | 34.73 | 34.28 |
| AT4G30060.1 | Thale cress | golgi | 35.77 | 34.16 |
| AT1G62305.1 | Thale cress | golgi | 30.29 | 30.69 |
| AT5G14550.1 | Thale cress | mitochondrion | 29.5 | 29.97 |
| AT1G11940.1 | Thale cress | golgi | 29.77 | 29.77 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821685 | UniProt:A0A178VDS7 | ProteinID:AEE76491.1 | ProteinID:ANM64928.1 | ArrayExpress:AT3G21310 |
| EnsemblPlantsGene:AT3G21310 | RefSeq:AT3G21310 | TAIR:AT3G21310 | RefSeq:AT3G21310-TAIR-G | EnsemblPlants:AT3G21310.1 | TAIR:AT3G21310.1 |
| EMBL:BT029209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 | EMBL:KP762450 | RefSeq:NP_001326929.1 |
| RefSeq:NP_566682.1 | ProteinID:OAP03052.1 | PFAM:PF02485 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000191 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 | UniProt:Q058K9 | TMHMM:TMhelix | UniParc:UPI00001634AD | SEG:seg |
Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
Coordinates
chr3:+:7497240..7500323
Molecular Weight (calculated)
44279.8 Da
IEP (calculated)
9.366
GRAVY (calculated)
-0.152
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.