Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 2
- plastid 1
- mitochondrion 1
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 97.14 | 96.89 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 56.88 | 74.49 |
| Solyc06g062490.2.1 | Tomato | golgi | 69.09 | 71.89 |
| KRH48972 | Soybean | cytosol | 38.44 | 69.48 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 69.09 | 68.73 |
| KRH13326 | Soybean | cytosol | 37.92 | 68.54 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 67.79 | 67.44 |
| Solyc08g065860.2.1 | Tomato | golgi | 62.08 | 62.73 |
| AT3G21310.1 | Thale cress | golgi | 62.34 | 62.66 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 57.14 | 61.45 |
| CDY51451 | Canola | golgi | 60.0 | 60.63 |
| Bra031273.1-P | Field mustard | golgi | 60.0 | 60.63 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 56.1 | 60.17 |
| CDY43927 | Canola | golgi | 60.0 | 59.38 |
| Bra030418.1-P | Field mustard | golgi | 60.0 | 59.38 |
| CDX87842 | Canola | golgi | 59.48 | 58.87 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 58.18 | 58.03 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 57.4 | 58.01 |
| AT1G51770.1 | Thale cress | golgi | 60.0 | 56.9 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 56.88 | 56.01 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 52.99 | 55.89 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 56.36 | 55.36 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 56.1 | 55.1 |
| EER93516 | Sorghum | golgi | 54.03 | 54.74 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 56.36 | 54.25 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 55.84 | 53.48 |
| Zm00001d033890_P001 | Maize | golgi | 57.66 | 52.73 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 54.55 | 52.11 |
| Os03t0731050-00 | Rice | plastid | 53.51 | 48.13 |
| Solyc05g009130.2.1 | Tomato | golgi | 46.75 | 48.0 |
| Solyc01g103150.2.1 | Tomato | golgi | 46.75 | 45.34 |
| Solyc12g036400.1.1 | Tomato | extracellular | 47.79 | 44.66 |
| Solyc05g009120.2.1 | Tomato | nucleus | 44.94 | 44.36 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 45.97 | 41.55 |
| Solyc05g009110.1.1 | Tomato | golgi | 40.78 | 40.78 |
| Solyc02g036250.1.1 | Tomato | cytosol | 16.36 | 40.13 |
| Solyc07g008940.2.1 | Tomato | golgi | 35.84 | 35.11 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 31.43 | 32.35 |
| Solyc02g080970.2.1 | Tomato | plastid | 31.43 | 30.95 |
Protein Annotations
| EnsemblPlants:Solyc03g121280.2.1 | EnsemblPlantsGene:Solyc03g121280.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002767141 | UniProt:K4BMS7 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3:-:69434563..69437511
Molecular Weight (calculated)
44649.1 Da
IEP (calculated)
9.546
GRAVY (calculated)
-0.183
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSRVGSQGS LEEGKDSVTK VVTQYKPLSI RLLQFLLLFL GIGIVFSLLS MYMVRYSVMQ NVIPMVQSRF QPCFQQLSLE SWIRPPSSLL HSMNDTQLFW
101: RASIVPQIKE YPFNRTRKIA FMFLTRGPIP LAPLWERFFK GNELYSIYIH SLPSYRPDFP PSSVFHGRQI PSQEAKWGRM SMCDAERRLL ANALLDISNE
201: WFILLSEACI PLHNFKAIYH YISKSRYSFM GAADEPGPFG RGRYNPNMVP EVNITEWRKG SQWFEVNRKL AVDIVKDDVY YPKFEQFCRP PCYVDEHYFP
301: TMLTIESPRL LANRTLTWVD WSRGGAHPAT FGKADINDQF FKRISESSIC VYNNQPTSLC YLFARKFAPS ALGPLLEHST KFLGF
101: RASIVPQIKE YPFNRTRKIA FMFLTRGPIP LAPLWERFFK GNELYSIYIH SLPSYRPDFP PSSVFHGRQI PSQEAKWGRM SMCDAERRLL ANALLDISNE
201: WFILLSEACI PLHNFKAIYH YISKSRYSFM GAADEPGPFG RGRYNPNMVP EVNITEWRKG SQWFEVNRKL AVDIVKDDVY YPKFEQFCRP PCYVDEHYFP
301: TMLTIESPRL LANRTLTWVD WSRGGAHPAT FGKADINDQF FKRISESSIC VYNNQPTSLC YLFARKFAPS ALGPLLEHST KFLGF
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.