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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031273.1-P Field mustard golgi 98.95 98.95
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 95.54 95.54
AT3G21310.1 Thale cress golgi 82.41 81.98
CDY43927 Canola golgi 73.75 72.24
CDX87842 Canola golgi 73.23 71.72
VIT_09s0002g02660.t01 Wine grape cytosol 52.23 67.69
KRH48972 Soybean cytosol 37.27 66.67
KRH13326 Soybean cytosol 36.22 64.79
KRH47176 Soybean cytosol, golgi, plasma membrane 62.73 61.76
KRH44223 Soybean cytosol, golgi, plasma membrane 61.94 60.98
Solyc03g121280.2.1 Tomato golgi, nucleus, plasma membrane 60.63 60.0
CDX80552 Canola cytosol 23.88 59.48
PGSC0003DMT400006434 Potato golgi, nucleus, plasma membrane 59.84 59.07
EER93518 Sorghum golgi, plasma membrane, plastid 59.06 58.29
CDX78440 Canola cytosol 49.08 57.89
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 55.38 57.81
CDX69735 Canola golgi 58.01 57.25
GSMUA_Achr1P14240_001 Banana golgi 53.28 56.7
Solyc06g062490.2.1 Tomato golgi 54.86 56.49
CDX97141 Canola golgi 57.22 56.48
CDX97139 Canola golgi 57.22 56.48
EER93516 Sorghum golgi 56.17 56.32
PGSC0003DMT400012489 Potato golgi 55.12 56.3
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 57.22 55.61
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 56.96 55.5
GSMUA_Achr3P25730_001 Banana golgi 52.23 55.43
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 56.96 55.36
EER93517 Sorghum golgi, mitochondrion, plasma membrane 57.22 54.23
CDX70417 Canola cytosol 42.52 54.0
HORVU4Hr1G010270.2 Barley golgi, peroxisome 56.43 53.75
Zm00001d033890_P001 Maize golgi 58.79 53.21
CDX88209 Canola golgi 48.82 53.14
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 55.91 52.85
CDX97140 Canola golgi 55.91 51.95
CDX78439 Canola golgi 54.59 51.87
Os03t0731050-00 Rice plastid 55.38 49.3
CDY31036 Canola golgi 47.77 48.28
CDX70416 Canola golgi 54.86 47.83
CDX94911 Canola golgi 47.51 47.01
CDX93443 Canola golgi 47.24 46.88
CDY20644 Canola golgi 47.51 46.41
CDX96025 Canola golgi, vacuole 48.56 44.47
CDX73016 Canola mitochondrion 39.63 43.52
CDY59035 Canola golgi 48.03 43.47
CDY44904 Canola golgi 46.46 43.17
CDX81507 Canola golgi 46.19 42.93
CDY19328 Canola golgi, mitochondrion 41.99 42.33
CDX96026 Canola golgi 43.31 41.67
CDX70676 Canola cytosol, golgi, nucleus 43.04 40.8
CDY20597 Canola golgi 35.7 40.0
CDX69465 Canola golgi 42.52 40.0
CDX78674 Canola cytosol, golgi, plasma membrane 42.26 39.95
CDY26504 Canola cytosol 15.22 38.16
CDX89388 Canola cytosol 22.57 37.72
CDY49466 Canola cytosol 24.67 36.58
CDX68738 Canola golgi 35.96 36.44
CDY28259 Canola golgi 35.96 36.44
CDY70337 Canola golgi 35.17 35.92
CDX94406 Canola golgi 34.91 35.09
CDY42774 Canola mitochondrion 34.65 34.83
CDX92736 Canola mitochondrion 34.65 34.83
CDY03552 Canola golgi, mitochondrion 34.91 33.17
CDY11878 Canola golgi 33.86 33.16
CDX88613 Canola golgi 33.86 33.16
CDY38285 Canola golgi 33.6 32.9
CDX83505 Canola mitochondrion 34.12 32.66
CDY12850 Canola mitochondrion 34.12 32.66
CDY25922 Canola golgi 33.33 32.65
CDY01412 Canola mitochondrion 34.12 32.58
CDY46724 Canola mitochondrion 34.38 32.51
CDY03361 Canola mitochondrion 33.6 32.41
CDY30178 Canola mitochondrion 33.86 32.09
CDY66853 Canola mitochondrion 33.33 32.07
CDY51089 Canola golgi, mitochondrion 33.07 31.9
CDX82625 Canola mitochondrion 33.07 31.9
CDY31228 Canola golgi 30.97 31.89
CDY66012 Canola mitochondrion 30.18 31.51
CDY57290 Canola cytosol 28.61 31.5
CDY24895 Canola mitochondrion 30.71 31.37
CDX69574 Canola mitochondrion 29.66 30.87
CDY08638 Canola mitochondrion 30.71 30.87
CDY09869 Canola mitochondrion 29.4 30.6
CDY21023 Canola golgi 29.66 30.05
CDY34605 Canola golgi 29.66 29.89
CDY14193 Canola mitochondrion 35.17 25.57
CDY66259 Canola cytosol 27.3 24.19
CDX97918 Canola golgi 39.63 23.93
CDX73017 Canola cytosol 0.26 7.14
Protein Annotations
MapMan:35.1GO:A0A078IN91UniProt:A0A078IN91EnsemblPlants:CDY51451ProteinID:CDY51451ProteinID:CDY51451.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008375GO:GO:0016020GO:GO:0016021
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00003492001InterPro:Glyco_trans_14PFAM:PF02485PANTHER:PTHR31042PANTHER:PTHR31042:SF54
TMHMM:TMhelixUniParc:UPI0004EF250ESEG:seg:::
Description
BnaA05g36680DBnaA05g36680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN91]
Coordinates
chrLK032996:-:55524..56758
Molecular Weight (calculated)
44284.8 Da
IEP (calculated)
8.734
GRAVY (calculated)
-0.161
Length
381 amino acids
Sequence
(BLAST)
001: MGKEEGVKDT PASNLKPTNQ CRTLLPMRVL QVFLMLVVLA LGISVVSMHM IKYLKVQTLA PTTFISTSDE ITTLESFIKP PSSVWHSMND SELLWRASIE
101: PRRYEYPFKR VPKMAFMFLT KGPLPFAPLW ERFFKGHEGF YLIYVHTLPD YKSDFPSSSV FYRRQIPSQH VAWGEMSMCE AERRLLANAL LDISNEWFVL
201: LSEACIPLRG FEFIYNYVSK SRYSFMGSAD EDGPYGRGRY SYAMGPEVQL SQWRKGSQWF EINRELALYI VEDIIYYHKF KEFCRPPCYV DEHYFPTMLS
301: IRYSHLLAKR TLTWTDWSKG GPHPTTFGKS VITEMFLKMI QEGQSCLYND QTSQVCYLFA RKFAPSALEP LLKLAPKVLG F
Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.