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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • plastid 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019894.1-P Field mustard golgi 95.5 95.76
AT1G10880.1 Thale cress golgi 87.3 85.49
CDY20597 Canola golgi 72.75 80.88
VIT_01s0011g03840.t01 Wine grape cytosol 50.79 64.86
GSMUA_Achr8P31730_001 Banana cytosol 42.06 58.03
CDX97918 Canola golgi 91.01 54.52
CDX80552 Canola cytosol 20.9 51.63
Solyc05g009130.2.1 Tomato golgi 51.06 51.47
CDX78440 Canola cytosol 39.68 46.44
CDX70676 Canola cytosol, golgi, nucleus 48.41 45.52
CDX78674 Canola cytosol, golgi, plasma membrane 48.41 45.41
CDX97141 Canola golgi 45.24 44.3
CDX97139 Canola golgi 45.24 44.3
CDX69465 Canola golgi 47.35 44.2
CDX69735 Canola golgi 44.97 44.04
CDY31036 Canola golgi 43.92 44.03
CDX70417 Canola cytosol 34.66 43.67
CDX81507 Canola golgi 47.09 43.41
CDY44904 Canola golgi 46.83 43.17
CDX93443 Canola golgi 43.65 42.97
CDX94911 Canola golgi 43.65 42.86
CDX73016 Canola mitochondrion 39.15 42.65
CDX78439 Canola golgi 44.97 42.39
CDY20644 Canola golgi 43.65 42.31
CDY59035 Canola golgi 46.83 42.04
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 42.33 41.99
CDY51451 Canola golgi 42.33 41.99
CDX96025 Canola golgi, vacuole 45.77 41.59
CDY43927 Canola golgi 42.06 40.87
CDX96026 Canola golgi 42.59 40.66
CDX87842 Canola golgi 41.8 40.62
CDX97140 Canola golgi 43.92 40.49
CDX88209 Canola golgi 37.3 40.29
CDY26504 Canola cytosol 15.87 39.47
CDX70416 Canola golgi 44.44 38.44
CDX89388 Canola cytosol 23.02 38.16
CDY28259 Canola golgi 37.83 38.03
CDX68738 Canola golgi 37.83 38.03
CDY49466 Canola cytosol 24.07 35.41
CDY70337 Canola golgi 34.39 34.85
CDY42774 Canola mitochondrion 33.86 33.77
CDX92736 Canola mitochondrion 33.86 33.77
CDX94406 Canola golgi 33.07 32.98
CDY11878 Canola golgi 33.86 32.9
CDX88613 Canola golgi 33.86 32.9
CDY03361 Canola mitochondrion 34.13 32.66
CDY38285 Canola golgi 33.6 32.65
CDY25922 Canola golgi 33.33 32.39
CDY66853 Canola mitochondrion 33.86 32.32
CDY12850 Canola mitochondrion 33.86 32.16
CDX83505 Canola mitochondrion 33.86 32.16
CDY51089 Canola golgi, mitochondrion 33.6 32.15
CDY01412 Canola mitochondrion 33.86 32.08
CDX82625 Canola mitochondrion 33.07 31.65
CDY30178 Canola mitochondrion 33.07 31.09
CDX69574 Canola mitochondrion 29.89 30.87
CDY09869 Canola mitochondrion 29.89 30.87
CDY24895 Canola mitochondrion 30.42 30.83
CDY46724 Canola mitochondrion 32.8 30.77
CDY03552 Canola golgi, mitochondrion 32.54 30.67
CDY08638 Canola mitochondrion 30.69 30.61
CDY31228 Canola golgi 29.89 30.54
CDY66012 Canola mitochondrion 29.1 30.14
CDY57290 Canola cytosol 26.98 29.48
CDY21023 Canola golgi 29.1 29.26
CDY34605 Canola golgi 28.84 28.84
CDY14193 Canola mitochondrion 33.07 23.86
CDY66259 Canola cytosol 25.4 22.33
CDX73017 Canola cytosol 0.79 21.43
Protein Annotations
EnsemblPlants:CDY19328EnsemblPlantsGene:GSBRNA2T00008846001GO:A0A078G3P2GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF17PFAM:PF02485ProteinID:CDY19328ProteinID:CDY19328.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EEE3F5UniProt:A0A078G3P2MapMan:35.1:::
Description
BnaC05g08370DBnaC05g08370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3P2]
Coordinates
chrLK032095:-:53894..55114
Molecular Weight (calculated)
43746.9 Da
IEP (calculated)
9.328
GRAVY (calculated)
-0.244
Length
378 amino acids
Sequence
(BLAST)
001: MKKPKITAFI KALNVRMKKE PITLRYIHIL GTVVFFTSIS SLVILLALYL NQRLQTSLFL QNDHLSSNPL TYPTLSPAPP PHGSDMADEE LVRRAAMAPR
101: EAAMNETHPK VAFMFLTRWN LPLSPLWEIF FKGHEDFYSI YVHTSPEFTE EPPESSVFYK KRIPSKTVEW GQSSMMDAER RLLSHALLKP SNSRFVLLSE
201: TCIPLFNFTT VYTYLMGSTR SFLGSFDDPR PMGRGRYNPK MLPHVSLSDW RKGNQWFELS RTVAAEIISD DRYYNVFKDH CRPPCYIDEH YIPTLVNKIC
301: PEMNSNRTVT WVDWSRGGSH PARFVRKDIQ VGFLDRIRFG SNCSYEGEVT NVCFLFARKF HVSTLEPLMK IAPYLYGI
Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.