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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008752.1-P Field mustard mitochondrion 99.73 99.73
CDY09869 Canola mitochondrion 96.17 96.17
AT5G14550.1 Thale cress mitochondrion 88.25 85.68
VIT_14s0066g00820.t01 Wine grape cytosol, golgi, mitochondrion, plastid 67.21 75.93
KRH56549 Soybean golgi 66.94 67.31
GSMUA_Achr2P14170_001 Banana mitochondrion 66.94 66.76
KRG93228 Soybean golgi 66.67 65.95
Solyc02g086550.2.1 Tomato golgi, mitochondrion 66.67 65.24
EES19116 Sorghum golgi 66.94 64.3
TraesCS1A01G114000.1 Wheat golgi 63.93 60.0
TraesCS1D01G115700.1 Wheat golgi 63.66 59.9
TraesCS1B01G134300.1 Wheat golgi 63.66 59.74
Os05t0170000-02 Rice golgi 64.75 59.4
PGSC0003DMT400001379 Potato mitochondrion 65.57 57.28
HORVU0Hr1G039960.6 Barley golgi 37.98 53.46
CDY24895 Canola mitochondrion 48.09 47.19
CDY08638 Canola mitochondrion 48.36 46.7
Zm00001d009810_P003 Maize mitochondrion, vacuole 65.85 45.39
CDY21023 Canola golgi 46.45 45.21
CDY31228 Canola golgi 45.36 44.86
CDY34605 Canola golgi 44.81 43.39
CDX80552 Canola cytosol 15.57 37.25
CDX89388 Canola cytosol 21.31 34.21
CDY49466 Canola cytosol 23.22 33.07
CDY66259 Canola cytosol 38.8 33.02
CDX78440 Canola cytosol 28.69 32.51
CDX68738 Canola golgi 33.06 32.18
CDY28259 Canola golgi 33.06 32.18
CDY03361 Canola mitochondrion 33.33 30.89
CDX73016 Canola mitochondrion 29.23 30.84
CDY66853 Canola mitochondrion 33.33 30.81
CDY20644 Canola golgi 32.51 30.51
CDY31036 Canola golgi 31.42 30.5
CDX70417 Canola cytosol 24.86 30.33
CDX69735 Canola golgi 31.97 30.31
CDX93443 Canola golgi 31.69 30.21
CDY51089 Canola golgi, mitochondrion 32.51 30.13
CDX97139 Canola golgi 31.69 30.05
CDX97141 Canola golgi 31.69 30.05
CDY19328 Canola golgi, mitochondrion 30.87 29.89
CDX94911 Canola golgi 31.42 29.87
CDY30178 Canola mitochondrion 32.79 29.85
CDY11878 Canola golgi 31.69 29.82
CDX88613 Canola golgi 31.69 29.82
CDX94406 Canola golgi 30.87 29.82
CDY46724 Canola mitochondrion 32.79 29.78
CDY03552 Canola golgi, mitochondrion 32.51 29.68
CDY51451 Canola golgi 30.87 29.66
CDY12850 Canola mitochondrion 32.24 29.65
CDX83505 Canola mitochondrion 32.24 29.65
CDX82625 Canola mitochondrion 31.97 29.62
CDY01412 Canola mitochondrion 32.24 29.57
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 30.6 29.4
CDX87842 Canola golgi 31.15 29.31
CDY43927 Canola golgi 31.15 29.31
CDY38285 Canola golgi 31.15 29.31
CDX92736 Canola mitochondrion 30.33 29.29
CDX78674 Canola cytosol, golgi, plasma membrane 32.24 29.28
CDX70676 Canola cytosol, golgi, nucleus 31.97 29.1
CDY25922 Canola golgi 30.87 29.05
CDY42774 Canola mitochondrion 30.05 29.02
CDX78439 Canola golgi 31.15 28.43
CDY20597 Canola golgi 26.23 28.24
CDX69465 Canola golgi 31.15 28.15
CDX96026 Canola golgi 30.05 27.78
CDX97140 Canola golgi 30.87 27.56
CDX88209 Canola golgi 26.23 27.43
CDX96025 Canola golgi, vacuole 30.87 27.16
CDX81507 Canola golgi 30.33 27.07
CDY59035 Canola golgi 30.87 26.84
CDY44904 Canola golgi 30.05 26.83
CDY26504 Canola cytosol 10.93 26.32
CDY66012 Canola mitochondrion 26.23 26.3
CDX70416 Canola golgi 30.87 25.86
CDY70337 Canola golgi 24.86 24.4
CDY57290 Canola cytosol 22.68 23.99
CDY14193 Canola mitochondrion 33.06 23.09
CDX97918 Canola golgi 29.51 17.12
CDX73017 Canola cytosol 0.55 14.29
Protein Annotations
EnsemblPlants:CDX69574EnsemblPlantsGene:GSBRNA2T00135585001GO:A0A078C097GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF6
PFAM:PF02485ProteinID:CDX69574ProteinID:CDX69574.1TMHMM:TMhelixUniParc:UPI0004EE348FMapMan:35.1
Description
BnaA10g19230D
Coordinates
chrLK031790:+:876549..879761
Molecular Weight (calculated)
43102.7 Da
IEP (calculated)
10.072
GRAVY (calculated)
-0.480
Length
366 amino acids
Sequence
(BLAST)
001: MMKKKASQQK LRSRWKRNLF ATLIFAFCLG SFVYFQARYI GITASLKPRL DQKPQIAFLF IARNRLPLEF VWDAFFLGED GKFSIYVHSR PGFVLSEATT
101: QSKYFLNRQV NDSIQVEWGE ATMIEAERVL LRHALRDPFN HRFVFLSDSC IPLYSFSYTY NYIMSTATSF VDSFADTKDK RYNPRMNPVI HVDNWRKGSQ
201: WVVLNRKHAE IVVNDTIVLP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LAQKGVDSEL TRRSLTHSAW DLTSTKSNER RGWHPMTYKF
301: SDATPHLIQS IKGIDNINYE TEYRREWCTS KGKPAPCFLF ARKFTRPAAL RLLRESILLK DKEQDS
Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)
001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK
Arabidopsis Description
At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.